Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D08
(881 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VSC1 Cluster: Signal recognition particle 9 kDa prote... 95 2e-18
UniRef50_P49458 Cluster: Signal recognition particle 9 kDa prote... 84 4e-15
UniRef50_P34642 Cluster: Signal recognition particle 9 kDa prote... 78 3e-13
UniRef50_Q9SMU7 Cluster: Signal recognition particle 9 kDa prote... 69 2e-10
UniRef50_Q4N7J3 Cluster: Signal recognition particle, putative; ... 68 4e-10
UniRef50_Q55QP8 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_A7ARX9 Cluster: Signal recognition particle SRP9 subuni... 57 5e-07
UniRef50_Q55GL2 Cluster: Signal recognition particle 9 kDa subun... 57 7e-07
UniRef50_Q6NVX0 Cluster: SRP9 protein; n=7; Euteleostomi|Rep: SR... 54 6e-06
UniRef50_Q4PBZ7 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A2YBE3 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_Q8IBG9 Cluster: Signal recognition particle, putative; ... 44 0.004
UniRef50_A2DMD3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.036
UniRef50_A2GMB9 Cluster: Putative uncharacterized protein; n=3; ... 36 1.4
UniRef50_UPI0000499521 Cluster: hypothetical protein 188.t00016;... 36 1.8
UniRef50_UPI0000DAE870 Cluster: hypothetical protein Rgryl_01000... 34 5.5
UniRef50_Q86G52 Cluster: Metacaspase 2; n=11; Plasmodium (Vincke... 34 5.5
UniRef50_Q8EYZ1 Cluster: Putative uncharacterized protein; n=4; ... 33 7.3
>UniRef50_Q9VSC1 Cluster: Signal recognition particle 9 kDa protein
homolog; n=4; Diptera|Rep: Signal recognition particle 9
kDa protein homolog - Drosophila melanogaster (Fruit
fly)
Length = 77
Score = 95.5 bits (227), Expect = 2e-18
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
M FV NW++FE A E +YL +P N R ++KY+HSKG +K+TDN KC+QYK E D+R
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60
Query: 544 KIDKFMSNLLRHMASND 594
KI+K SNL+ HMAS +
Sbjct: 61 KIEKITSNLVGHMASKE 77
>UniRef50_P49458 Cluster: Signal recognition particle 9 kDa protein;
n=18; Coelomata|Rep: Signal recognition particle 9 kDa
protein - Homo sapiens (Human)
Length = 86
Score = 84.2 bits (199), Expect = 4e-15
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +1
Query: 382 WEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKIDKFM 561
WEEF +AAE LYL DP+ R +KY HS G VK+TD+ CL YKT+ QDV+KI+KF
Sbjct: 7 WEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFH 66
Query: 562 SNLLRHMASND 594
S L+R M + +
Sbjct: 67 SQLMRLMVAKE 77
>UniRef50_P34642 Cluster: Signal recognition particle 9 kDa protein
homolog; n=6; Bilateria|Rep: Signal recognition particle
9 kDa protein homolog - Caenorhabditis elegans
Length = 76
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
MT+ +W+EF KAAE L+ +P R+ KY+H+KG +K+TD+ CLQY T QDV+
Sbjct: 1 MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVK 60
Query: 544 KIDKFMSNLLR 576
K++K S LLR
Sbjct: 61 KLEKLSSTLLR 71
>UniRef50_Q9SMU7 Cluster: Signal recognition particle 9 kDa protein;
n=7; Magnoliophyta|Rep: Signal recognition particle 9
kDa protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 68.9 bits (161), Expect = 2e-10
Identities = 28/74 (37%), Positives = 47/74 (63%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
M ++ +W+EF + L+ DP +TRY +KY H G +K+TDNK+CL++KT+ Q+ +
Sbjct: 1 MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60
Query: 544 KIDKFMSNLLRHMA 585
K++K + MA
Sbjct: 61 KMEKLNNIFFTLMA 74
>UniRef50_Q4N7J3 Cluster: Signal recognition particle, putative;
n=1; Theileria parva|Rep: Signal recognition particle,
putative - Theileria parva
Length = 105
Score = 67.7 bits (158), Expect = 4e-10
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
MT+ NW EF A +LY + P+ T+Y KY KG +K+TDNK+C +++ + + R
Sbjct: 1 MTYFDNWNEFLHEARLLYFRTPLKTKYVFKYIKGKGKITLKVTDNKQCCKFRVDPESSSR 60
Query: 544 KIDKFMSNLLRHMASND 594
I++F + L S D
Sbjct: 61 LINQFNALFLNWSVSKD 77
>UniRef50_Q55QP8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 142
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
M ++ NW +FE AA LY + P RY VK+ G +KITD+ KC++YKT +
Sbjct: 1 MVYIKNWTDFEAAATDLYARSPNKVRYCVKFQPKTGHLVLKITDDLKCIKYKTFSSIILN 60
Query: 544 KIDKFMSNLLRHMAS 588
+ D LL M++
Sbjct: 61 RFDSLNLRLLSSMSN 75
>UniRef50_A7ARX9 Cluster: Signal recognition particle SRP9 subunit,
putative; n=1; Babesia bovis|Rep: Signal recognition
particle SRP9 subunit, putative - Babesia bovis
Length = 102
Score = 57.2 bits (132), Expect = 5e-07
Identities = 25/77 (32%), Positives = 43/77 (55%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
MT+ W F +AA L+L P+ TRYSVKY + +K+TD++KC ++K ++R
Sbjct: 1 MTYYDTWNGFIQAAHTLFLAQPLKTRYSVKYVKGTESIVLKVTDDRKCCKFKLAKSGNLR 60
Query: 544 KIDKFMSNLLRHMASND 594
++++ L + D
Sbjct: 61 QLNQLNKLFLTWSVTRD 77
>UniRef50_Q55GL2 Cluster: Signal recognition particle 9 kDa subunit;
n=1; Dictyostelium discoideum AX4|Rep: Signal
recognition particle 9 kDa subunit - Dictyostelium
discoideum AX4
Length = 75
Score = 56.8 bits (131), Expect = 7e-07
Identities = 23/69 (33%), Positives = 43/69 (62%)
Frame = +1
Query: 370 FVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKI 549
++ +W+EF +E LY DP TR+S K+ H +G +K+T++ L+++T+ + D ++I
Sbjct: 2 YIEDWDEFYDKSEQLYRTDPKRTRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKRI 61
Query: 550 DKFMSNLLR 576
D+ S R
Sbjct: 62 DQINSLFFR 70
>UniRef50_Q6NVX0 Cluster: SRP9 protein; n=7; Euteleostomi|Rep: SRP9
protein - Homo sapiens (Human)
Length = 82
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 382 WEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDN--KKCLQYKTEVQ 531
WEEF +AAE LYL DP+ R +KY HS G VK+TD+ ++CL +Q
Sbjct: 7 WEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVRQCLALLLRLQ 58
>UniRef50_Q4PBZ7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 145
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/77 (25%), Positives = 44/77 (57%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
M ++ +W EF++ + LY Q+P +RY +K S + +K+TD+ ++Y+T +
Sbjct: 1 MVYIKDWPEFQQRSIKLYRQNPHKSRYLIKSRPSTHSLTLKVTDDTTTIKYRTRSSAILG 60
Query: 544 KIDKFMSNLLRHMASND 594
+++ F ++ MA ++
Sbjct: 61 RLEVFNKAMMLAMAGSE 77
>UniRef50_A2YBE3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 81
Score = 44.4 bits (100), Expect = 0.004
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQY 516
M + +W+EF + L+ P TRY VKY H +G +K+TDN + + +
Sbjct: 1 MVYFDSWDEFVSKSVELFRNHPDTTRYVVKYRHCEGKLVLKVTDNHENIHW 51
>UniRef50_Q8IBG9 Cluster: Signal recognition particle, putative;
n=3; Plasmodium|Rep: Signal recognition particle,
putative - Plasmodium falciparum (isolate 3D7)
Length = 109
Score = 44.4 bits (100), Expect = 0.004
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 361 VMTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDV 540
++ + +W +F + + P TRY +K VK+TDN + YK + ++
Sbjct: 6 ILVYAESWNDFIHTTRNIISKSPDKTRYVIKLHRPSETIIVKVTDNNNSIMYKLDKNDNM 65
Query: 541 RKIDKFMSNLL 573
+KI++ S L
Sbjct: 66 KKIEELNSLFL 76
>UniRef50_A2DMD3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 106
Score = 41.1 bits (92), Expect = 0.036
Identities = 28/103 (27%), Positives = 53/103 (51%)
Frame = +1
Query: 286 HKLKNTGTLTNFY*YLISVNSQ*LAVMTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHS 465
+KL++ L NF + S ++Q M + + + FE+ A+ + DP TR + KY
Sbjct: 5 NKLEHFSDLGNFEKFT-SFDAQ--LSMVLLTDIKVFEEKAKEMIQADPKKTRLTTKYKKD 61
Query: 466 KGAFNVKITDNKKCLQYKTEVQQDVRKIDKFMSNLLRHMASND 594
F +KI + K + E + D ++ + +S+LL H+ +N+
Sbjct: 62 SHIFVMKIFNGKDAYKINIEKENDFKESQRIISSLL-HLMTNE 103
>UniRef50_A2GMB9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 494
Score = 35.9 bits (79), Expect = 1.4
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 557 NLSIFLTSCCTSVLY*RHFLLSVILTLNAPFECEYLTLYRVFIGSCRYNISAAFSNSSQF 378
NL FL TS Y + F SV N P CEYL + V I + N +AF +++Q+
Sbjct: 260 NLQAFLVYLDTSKNYKKCFPFSV--RFNFPSLCEYLISHGVDINTRDKNYYSAFFHAAQY 317
Query: 377 GTKVI 363
G ++I
Sbjct: 318 GNRLI 322
>UniRef50_UPI0000499521 Cluster: hypothetical protein 188.t00016;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 188.t00016 - Entamoeba histolytica HM-1:IMSS
Length = 78
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 373 VPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKID 552
V + +F + AE L+ + NTRY +KY +K+TDN K Y + ++++ +
Sbjct: 3 VESLAKFREYAEALFRANQ-NTRYFMKYRDDDLIITLKVTDNVKTYTYDIKDRKEMNAVT 61
Query: 553 KFMSNLLRHMA 585
+ ++ +M+
Sbjct: 62 ELNMKMMSYMS 72
>UniRef50_UPI0000DAE870 Cluster: hypothetical protein Rgryl_01000560;
n=4; Rickettsiella grylli|Rep: hypothetical protein
Rgryl_01000560 - Rickettsiella grylli
Length = 4172
Score = 33.9 bits (74), Expect = 5.5
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 364 MTFVPNWEEFEKAAEMLYLQ-DPINTRYSVKYS-HSKGAFNVK-ITDNKK 504
++ V W+EF K E L LQ DPI YSV S HS G + +K +T +KK
Sbjct: 2604 LSAVELWDEFGKR-ETLELQIDPITHTYSVDLSHHSSGVYQLKPLTQDKK 2652
>UniRef50_Q86G52 Cluster: Metacaspase 2; n=11; Plasmodium
(Vinckeia)|Rep: Metacaspase 2 - Plasmodium berghei
Length = 1454
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 244 NM*VLNNTLYTHGAH--TNYRLDIRLNYNQGILI 149
N+ NNTLY +G H NY D+ YNQG+ I
Sbjct: 143 NLNTKNNTLYNYGNHIYNNYNGDVLYQYNQGVNI 176
>UniRef50_Q8EYZ1 Cluster: Putative uncharacterized protein; n=4;
Leptospira|Rep: Putative uncharacterized protein -
Leptospira interrogans
Length = 371
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 430 INTRYSVK-YSHSKGAFNVKITDNKKCLQYK-TEVQQDVRKIDKFMS 564
+ +SVK S KG F++KI +N+ L + E+QQDV I F+S
Sbjct: 106 VTKEFSVKELSAEKGKFDLKIENNRMSLNSEGIEIQQDVENIKLFLS 152
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,544,130
Number of Sequences: 1657284
Number of extensions: 10169683
Number of successful extensions: 20074
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20064
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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