Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D08
         (881 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071180-1|AAL48802.1|   77|Drosophila melanogaster RE23260p pro...    95   9e-20
AE014296-1346|AAF50504.1|   77|Drosophila melanogaster CG8268-PA...    95   9e-20
AY118396-1|AAM48425.1|  605|Drosophila melanogaster RE56844p pro...    29   6.4  
AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p pro...    29   6.4  
AE014134-2100|AAF53123.1|  605|Drosophila melanogaster CG14940-P...    29   6.4  

>AY071180-1|AAL48802.1|   77|Drosophila melanogaster RE23260p
           protein.
          Length = 77

 Score = 95.5 bits (227), Expect = 9e-20
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = +1

Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
           M FV NW++FE A E +YL +P N R ++KY+HSKG   +K+TDN KC+QYK E   D+R
Sbjct: 1   MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60

Query: 544 KIDKFMSNLLRHMASND 594
           KI+K  SNL+ HMAS +
Sbjct: 61  KIEKITSNLVGHMASKE 77


>AE014296-1346|AAF50504.1|   77|Drosophila melanogaster CG8268-PA
           protein.
          Length = 77

 Score = 95.5 bits (227), Expect = 9e-20
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = +1

Query: 364 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 543
           M FV NW++FE A E +YL +P N R ++KY+HSKG   +K+TDN KC+QYK E   D+R
Sbjct: 1   MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60

Query: 544 KIDKFMSNLLRHMASND 594
           KI+K  SNL+ HMAS +
Sbjct: 61  KIEKITSNLVGHMASKE 77


>AY118396-1|AAM48425.1|  605|Drosophila melanogaster RE56844p
           protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 425 IQ*ILGTVLNIHIQKVHLMSKLLTIKSAFNTKQK 526
           I+ +LGT +  H Q++  M +LLT++ A   KQK
Sbjct: 345 IEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK 378


>AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p
           protein.
          Length = 834

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 425 IQ*ILGTVLNIHIQKVHLMSKLLTIKSAFNTKQK 526
           I+ +LGT +  H Q++  M +LLT++ A   KQK
Sbjct: 574 IEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK 607


>AE014134-2100|AAF53123.1|  605|Drosophila melanogaster CG14940-PA
           protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 425 IQ*ILGTVLNIHIQKVHLMSKLLTIKSAFNTKQK 526
           I+ +LGT +  H Q++  M +LLT++ A   KQK
Sbjct: 345 IEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,598,818
Number of Sequences: 53049
Number of extensions: 450644
Number of successful extensions: 831
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)