Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D08
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   8.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   8.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   8.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 262 NISRV*VIHKLKNTGTLTNFY*YLISVNSQ*LAVMTFVP 378
           N+S   VI + K+  T TN+Y + ++V+   L +    P
Sbjct: 71  NVSTCVVIARNKSMHTATNYYLFSLAVSDLLLLISGLPP 109


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 158 NFNYVLMYVLFLFIYSMTCSNEHVKTIT 75
           NF+ + ++ +FL +     SNE +  +T
Sbjct: 4   NFSIMFIHSIFLILIIFIYSNETIAQVT 31


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 158 NFNYVLMYVLFLFIYSMTCSNEHVKTIT 75
           NF+ + ++ +FL +     SNE +  +T
Sbjct: 4   NFSIMFIHSIFLILIIFIYSNETIAQVT 31


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 425 SCRYNISAAFSNSSQFGTKVITANY 351
           S RY ++ AF  S  FGT  I +++
Sbjct: 323 SKRYKMAVAFMLSHPFGTPRIMSSF 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,660
Number of Sequences: 438
Number of extensions: 3251
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)