Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_D07
(887 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 133 5e-30
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 9e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 89 2e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 46 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 43 0.009
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.085
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.8
UniRef50_Q6MMS6 Cluster: Translation initiation factor IF-2; n=1... 36 1.8
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 35 3.2
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.6
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.4
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.4
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 7.4
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 133 bits (322), Expect = 5e-30
Identities = 71/108 (65%), Positives = 72/108 (66%)
Frame = +1
Query: 487 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRX 666
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFR- 60
Query: 667 XXXXXXXXXXFSLREAWRFLIAHAVGISXXXXXXRSKLGCVPEPPVQP 810
FSLREAWRFLIAHAVGIS PP P
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 93.1 bits (221), Expect = 9e-18
Identities = 44/52 (84%), Positives = 46/52 (88%)
Frame = +1
Query: 505 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 660
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLF 95
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = +1
Query: 511 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 660
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF 127
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 318 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 416
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -1
Query: 560 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 381
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 294 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 452
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 53.6 bits (123), Expect = 6e-06
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +3
Query: 645 VRSPVPTXAAYRXTXSAFLPSGSVALSHSSRCRYLSS 755
+RSPVPT SAFLPSGSVALSHSSRCRYLSS
Sbjct: 1 MRSPVPTLPL-TGYLSAFLPSGSVALSHSSRCRYLSS 36
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +1
Query: 454 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 633
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 634 EAPSCALLF 660
++PS +LLF
Sbjct: 104 QSPSYSLLF 112
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -3
Query: 747 DTYSVSYEKAPRFPKGEXXXRYXGKRXGSEQESARGSFQGETP 619
DT SVSYEKAPRFPKG+ + GKR G + + G+ ++P
Sbjct: 44 DTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
Score = 37.5 bits (83), Expect = 0.45
Identities = 24/47 (51%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 713 ASRREKGGXGXPVSGX--GRNRRAHEGASRGKRLVSL*SCRVSPPLT 579
A R KG VSG GRNRRAHEGA+ K SL PPLT
Sbjct: 53 APRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 97 DPDMIRYIDEFGQTTTRMQ 153
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +1
Query: 793 EPPVQPDRXALSGXYXLXXHPGKTXLSPLA 882
EPPVQPDR ALSG Y L +P + LSPLA
Sbjct: 3 EPPVQPDRCALSGNYRLESNPVRHDLSPLA 32
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 292 SALMNRPTRGERRFAYW 342
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.085
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 364 ERGSGRAPNTQTASPRALADSLMQ 293
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 587 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 417
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 416 SELIPL 399
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q6MMS6 Cluster: Translation initiation factor IF-2; n=1;
Bdellovibrio bacteriovorus|Rep: Translation initiation
factor IF-2 - Bdellovibrio bacteriovorus
Length = 975
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 723 KAPRFPKGEXXXRYXGKRXGSEQESARGSFQGETPGIFIVLSGFA-TSDLSVDFCDARQG 547
+AP+ P+GE R G EQ A SF G+ PG F +G A T ++ F A Q
Sbjct: 241 QAPQRPQGERPAGGFTPRAGGEQRGASASFTGQRPGGFNRPAGGAPTRNIRTGFVAANQP 300
Query: 546 GGAYGKTPATR 514
+T A R
Sbjct: 301 PEPIVETGADR 311
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 34.7 bits (76), Expect = 3.2
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 608 IKIPGVSPWKLPRALSCSDPC--RLPXYLXRLSPFGKRG--AFS*LTL*VSQFXCRSXAP 775
+KI VS LP ALSCS+P R+P + PF G A S + CRS AP
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIP-----VPPFSLAGSVALSHSSHSGISARCRSFAP 86
Query: 776 SWAV 787
SWAV
Sbjct: 87 SWAV 90
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 175 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 342
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.6
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -3
Query: 627 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 448
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 447 DSVD 436
D +D
Sbjct: 304 DHID 307
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 255 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 91
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.4
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 421 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 600
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 601 QDYKDT 618
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 427 NTVIHRIRGITQERTCE 477
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.5 bits (73), Expect = 7.4
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -3
Query: 678 GKRXGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGS 499
G GS+Q S+ G++P + GFA+ + +F +A GG + +P + P Y S
Sbjct: 578 GLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLS 637
Query: 498 WP 493
P
Sbjct: 638 VP 639
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 560 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 390
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,029,043
Number of Sequences: 1657284
Number of extensions: 14760595
Number of successful extensions: 37389
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 35902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37374
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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