Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D06
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266     33   0.31 
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   3.8  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    29   6.6  
04_04_0675 + 27183826-27184443                                         29   6.6  

>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
          Length = 60

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 PXXPXXGGXR--PXKKKKXXXXXAXXKKKKKKKKXXXXK 328
           P  P  GG R  P KKKK        KKKKKKKK    K
Sbjct: 15  PAEPAKGGLRGLPKKKKKKKKKKKKKKKKKKKKKKKKKK 53


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 199 PPXXPXPPXPXXXGXPPPKKKK 264
           PP  P PP P   G PPP   K
Sbjct: 370 PPRPPPPPPPIKKGAPPPAPPK 391



 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 199 PPXXPXPPXPXXXGXPPPKKK 261
           PP  P PP P     PPP KK
Sbjct: 362 PPPPPPPPPPRPPPPPPPIKK 382


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 312 FFFFFFFXXXAXXXXXFFFFXG 247
           FFFFFFF         FFFF G
Sbjct: 89  FFFFFFFFFFFFFFFFFFFFSG 110


>04_04_0675 + 27183826-27184443
          Length = 205

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 199 PPXXPXPPXPXXXGXPPPKKKK 264
           PP    PP P     PPPKK++
Sbjct: 110 PPPASPPPLPPAPSSPPPKKRR 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.148    0.496 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,173,137
Number of Sequences: 37544
Number of extensions: 139129
Number of successful extensions: 1189
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)