Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_D05
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0300 + 23932947-23933196,23934022-23934123,23934249-239343...    93   4e-19
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443...    91   2e-18
01_01_1199 - 9657169-9657254,9657369-9657395,9657485-9657553,965...    89   5e-18
08_01_0098 - 700443-700660,701112-701268,701586-701678,701763-70...    31   1.3  
03_05_0830 + 28034179-28035492                                         29   5.2  

>05_05_0300 +
           23932947-23933196,23934022-23934123,23934249-23934317,
           23934406-23934446
          Length = 153

 Score = 92.7 bits (220), Expect = 4e-19
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = +3

Query: 381 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 533
           EIEYYA+L K  VHH+ GNN++LGTACGKYYRVC L+I DPGDSDII T P
Sbjct: 100 EIEYYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTP 150



 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +2

Query: 164 HCFILGFISIYASKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLV 343
           H F+  F+ + +   V A  QKK+ ++IN++L LVMKSGKY LGYK  LKTLR  K KL+
Sbjct: 29  HHFVAMFLLV-SDWWVVAMMQKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLI 87

Query: 344 IIAKNAPPXKE 376
           I+A N PP ++
Sbjct: 88  ILANNCPPLRK 98


>01_06_1103 -
           34543915-34543955,34544069-34544137,34544294-34544395,
           34545603-34545708,34545998-34546079,34546850-34547142
          Length = 230

 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 36/53 (67%), Positives = 45/53 (84%)
 Frame = +3

Query: 381 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 539
           EIEYYA+L K  V+H++GNN++LGTACGKYYRVC L++ DPGDSDI   LPE+
Sbjct: 177 EIEYYAMLGKVSVYHFNGNNVDLGTACGKYYRVCCLSVVDPGDSDITKQLPES 229



 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = +2

Query: 227 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPXKE 376
           KK  E IN++L LVMKSGKY LGYK  LKTLR  K KLVI+A N PP ++
Sbjct: 126 KKNAEGINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLVIVANNCPPLRK 175


>01_01_1199 -
           9657169-9657254,9657369-9657395,9657485-9657553,
           9657922-9658023,9659895-9660000,9660145-9660165
          Length = 136

 Score = 89.0 bits (211), Expect = 5e-18
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = +3

Query: 381 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITT 527
           EIEYYA+LAK  VHH+ GNN++LGTACGKY+RVC L+I DPGDSDII T
Sbjct: 59  EIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107



 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 37/57 (64%), Positives = 46/57 (80%)
 Frame = +2

Query: 206 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPXKE 376
           MVAAKK KK+ ++IN++L LVMKSGKY LGYK  L+TLR  KAKLVII+ N PP ++
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRK 57


>08_01_0098 -
           700443-700660,701112-701268,701586-701678,701763-702149,
           702755-702829,703486-703609,703693-703832,703904-703993,
           704254-704298,704917-705042,705138-705272,705966-706451,
           706539-706596,706728-706855,707209-707463
          Length = 838

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +1

Query: 310 ENSSTRQSKAGYHR*KCSSX*GNLRLNTTPS*LRQVFTTTAGTT 441
           EN+++++SK+ ++  KC++   N+ L      +R+ F+   G T
Sbjct: 657 ENTASKESKSNFYSDKCTAYMSNIDLTANEEHIRRFFSDIGGVT 700


>03_05_0830 + 28034179-28035492
          Length = 437

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 275 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 358
           +GKY  G   TLKTL  G  + +I+ +N
Sbjct: 299 TGKYVFGVDDTLKTLEMGAVETLIVWEN 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,453,497
Number of Sequences: 37544
Number of extensions: 267225
Number of successful extensions: 510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)