Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_C21
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137...    32   0.70 
11_01_0024 + 163588-163897,164303-164406                               30   2.1  
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752...    29   6.5  
09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574...    29   6.5  
11_06_0380 + 22937941-22937984,22939375-22941481                       28   8.6  
03_06_0471 + 34169562-34169892,34170121-34170347                       28   8.6  

>03_03_0132 +
           14711645-14711839,14712641-14712970,14713689-14713751,
           14713833-14713906,14714004-14714099,14714705-14714759,
           14714867-14714971,14715054-14715135,14715450-14715562,
           14715717-14716118
          Length = 504

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 622 PSHTGYQPYEPPTADIYTQQSYSAPXSY-QDGGYSAPAA 735
           P ++GY P   P A  Y  Q YS+P  Y   GG+SAPAA
Sbjct: 434 PGNSGYAP--APGA--YPGQMYSSPMQYGASGGFSAPAA 468


>11_01_0024 + 163588-163897,164303-164406
          Length = 137

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = +2

Query: 566 VVEVGDLLDI-HLLNQMDMYHHTLDISHMSHQLL--IFIHNNH 685
           V++ GDL+D  HLL   +  H    + H+SH+LL  +F+++ H
Sbjct: 26  VLDNGDLVDDDHLLEHDEQLHVHYLLGHVSHKLLDTLFLYSTH 68


>12_01_0818 +
           7524549-7524747,7524855-7525863,7525964-7526108,
           7526206-7526295,7526404-7526553,7527333-7528094,
           7528177-7528496,7528581-7528707,7528792-7528959,
           7529054-7530466,7530563-7530823,7530983-7531144,
           7531976-7532121,7532601-7532667,7533483-7533587
          Length = 1707

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 189 GRYWMWTRSLRSRWKSSPSITASA 118
           GR WMWTR LR   K +  +  S+
Sbjct: 829 GRIWMWTRCLRCNGKPTQRVIISS 852


>09_02_0203 -
           5746068-5746307,5746469-5746729,5746833-5748239,
           5748588-5748714,5748800-5749119,5749202-5749963,
           5750749-5750898,5751007-5751096,5751196-5751340,
           5751440-5751617,5751753-5752448,5752555-5752753
          Length = 1524

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 189 GRYWMWTRSLRSRWKSSPSITASA 118
           GR WMWTR LR   K +  +  S+
Sbjct: 784 GRIWMWTRCLRCNGKPTQRVIISS 807


>11_06_0380 + 22937941-22937984,22939375-22941481
          Length = 716

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 213 RWCTTRLNGRYWMWTRSLRSRWKSSPSITASAHRATS 103
           RW  +R  G++ +W  +  +   S P+    AHRA S
Sbjct: 483 RWDFSRFQGQWALWVANRVNGGDSDPAALGPAHRALS 519


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 610 NGYVPSHTGYQPYEPPTADIYTQQSYSAPXSYQDGGYSAP 729
           +GY PS  GY P   P +  Y QQ    P  Y   G+  P
Sbjct: 70  SGYPPSQGGYPPGAYPPSG-YPQQPGYPPAGYPGHGHGPP 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.133    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,851,466
Number of Sequences: 37544
Number of extensions: 293071
Number of successful extensions: 972
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)