Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_C19
         (885 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051460-1|AAK92884.1| 1022|Drosophila melanogaster GH13214p pro...    75   1e-13
AE014298-1198|AAF46388.1| 1022|Drosophila melanogaster CG12113-P...    75   1e-13
AY058370-1|AAL13599.1|  370|Drosophila melanogaster GH13855p pro...    30   4.9  
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB...    30   4.9  
AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA ...    29   6.5  
AY325814-1|AAP88969.1|  509|Drosophila melanogaster traffic jam ...    29   8.5  
AE014134-3104|AAF53804.2|  509|Drosophila melanogaster CG10034-P...    29   8.5  

>AY051460-1|AAK92884.1| 1022|Drosophila melanogaster GH13214p protein.
          Length = 1022

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
 Frame = +2

Query: 110  DLVVRFSAGLVAGDRCWRAEVTRV---RCADALRVRVAYPDRRVHAXXXXXXXXXXXXXX 280
            D V++ +AGL+A    + AE+  +   + AD +R+++ YPD+ +H               
Sbjct: 905  DNVIKVTAGLIAAVP-FVAEIDNLLESQKAD-MRIKIKYPDQHMHTVVPKQSDFKPIMTE 962

Query: 281  XQNEDGTQNLRLLTKVLISHGVWSEPCGVDISICLAVEEGGGREPPQLVELCKPVRVTVA 460
             Q E  T N+RL T +L+SH VW+E   V+I +CLAV  G        +ELCKP +V  A
Sbjct: 963  -QGEHKT-NVRLRTTILLSHSVWTESSLVEIQLCLAVRPGSE------LELCKPAKVLFA 1014

Query: 461  PKPIKRGI 484
            PKP++RGI
Sbjct: 1015 PKPVRRGI 1022


>AE014298-1198|AAF46388.1| 1022|Drosophila melanogaster CG12113-PA
            protein.
          Length = 1022

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
 Frame = +2

Query: 110  DLVVRFSAGLVAGDRCWRAEVTRV---RCADALRVRVAYPDRRVHAXXXXXXXXXXXXXX 280
            D V++ +AGL+A    + AE+  +   + AD +R+++ YPD+ +H               
Sbjct: 905  DNVIKVTAGLIAAVP-FVAEIDNLLESQKAD-MRIKIKYPDQHMHTVVPKQSDFKPIMTE 962

Query: 281  XQNEDGTQNLRLLTKVLISHGVWSEPCGVDISICLAVEEGGGREPPQLVELCKPVRVTVA 460
             Q E  T N+RL T +L+SH VW+E   V+I +CLAV  G        +ELCKP +V  A
Sbjct: 963  -QGEHKT-NVRLRTTILLSHSVWTESSLVEIQLCLAVRPGSE------LELCKPAKVLFA 1014

Query: 461  PKPIKRGI 484
            PKP++RGI
Sbjct: 1015 PKPVRRGI 1022


>AY058370-1|AAL13599.1|  370|Drosophila melanogaster GH13855p
           protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 214 GHAHAQRVRTAHARHLGSPAAIAGHEPR-AEPHHQVVVRLAGSTMLALAH-HDR*G 53
           GH H Q   ++  +H GS     GH  R  +PHH  V  LA STM +  H  DR G
Sbjct: 318 GHQHHQHQHSSSGKHQGS-----GHGHREQQPHH--VHSLATSTMASSRHPRDRHG 366


>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
            protein.
          Length = 5146

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 459  ATVTLTGLQSSTSCGGSLPPPSSTARHIEMSTPHGSDHTPCEIKT 325
            ++++ TG QSS+S     PPPS++   I++  P   + T  +  T
Sbjct: 1510 SSLSTTGGQSSSSAPPPPPPPSASTMDIDVDVPADGESTQSKSST 1554


>AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA
           protein.
          Length = 746

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 495 KIIYIPRLIGFGATVTLTGLQSSTSCGGSLPPPSSTARHIEMSTP 361
           +I+ +P L+    T T+T   SS+S     PP SST   +    P
Sbjct: 385 EIVKVPALLAEPTTTTVTKGSSSSSSSSPKPPASSTTPLVTKKKP 429


>AY325814-1|AAP88969.1|  509|Drosophila melanogaster traffic jam
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 21/68 (30%), Positives = 24/68 (35%)
 Frame = -3

Query: 268 RPEMVPGRQQRVHPAVRVGHAHAQRVRTAHARHLGSPAAIAGHEPRAEPHHQVVVRLAGS 89
           RP   PG Q+      R    +A +   AH  H G P   A H P     H   V L  S
Sbjct: 226 RPLPYPGSQEEAEEWDRQ-RDYALQAAAAHHHHHGQPLMQAQHHPHGHGGHPHQVMLQQS 284

Query: 88  TMLALAHH 65
                 HH
Sbjct: 285 KYPHHHHH 292


>AE014134-3104|AAF53804.2|  509|Drosophila melanogaster CG10034-PA
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 21/68 (30%), Positives = 24/68 (35%)
 Frame = -3

Query: 268 RPEMVPGRQQRVHPAVRVGHAHAQRVRTAHARHLGSPAAIAGHEPRAEPHHQVVVRLAGS 89
           RP   PG Q+      R    +A +   AH  H G P   A H P     H   V L  S
Sbjct: 226 RPLPYPGSQEEAEEWDRQ-RDYALQAAAAHHHHHGQPLMQAQHHPHGHGGHPHQVMLQQS 284

Query: 88  TMLALAHH 65
                 HH
Sbjct: 285 KYPHHHHH 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,179,109
Number of Sequences: 53049
Number of extensions: 474478
Number of successful extensions: 1560
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)