Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_C18
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069446-1|AAL39591.1|  500|Drosophila melanogaster LD16038p pro...    44   4e-04
AE014134-50|AAF51539.2|  500|Drosophila melanogaster CG3709-PA p...    44   4e-04
AY094997-1|AAM11325.1|  441|Drosophila melanogaster AT11889p pro...    30   4.9  
AE014134-1333|AAF52552.2|  441|Drosophila melanogaster CG7196-PA...    30   4.9  

>AY069446-1|AAL39591.1|  500|Drosophila melanogaster LD16038p
           protein.
          Length = 500

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 3/224 (1%)
 Frame = +3

Query: 219 MDNKAIVKFCKEVGCCDICCLRYLGLKNPATYENYKEYILKYTXXXXXXXXXXXXXXITS 398
           M N+ +V++ +  G C+IC LRYL  +  A Y N  E + K                +  
Sbjct: 1   MKNQDLVEYLRSCGVCEICQLRYLKARG-AEYRNINETLQK--------------LDVKL 45

Query: 399 NSVDNINGNTDVNGCDDEXXXXXXXISICVSCFGILQEENWSECFNMVKETLEKKRYECS 578
           N  +N+  N ++   +         + +C +C G+  ++  +E  + +  + +  +Y+C 
Sbjct: 46  N--ENVE-NEELVISEGSQPSKRARLGVCSTCLGLFSKDFQNELLSSILAS-DFAKYDCQ 101

Query: 579 TFACALSAPIATLLRDKAIILHLSDAFK---DYKEDTLTPLKEAWKWTFGVKLAAQIXMT 749
               A+  P++  LR  A+   L   F    D       P+KEA K      +  ++   
Sbjct: 102 KIVLAICLPMSLQLRQLAMWFALRRRFGPSIDENNPPDVPIKEAVKLILHPIICEKLAKV 161

Query: 750 LDSGAISPVTDYT*YGVS**TQELEILKQLSPSLFXERRXXKRR 881
            D+  +    D T + +    +E+E L +L+   F  +   ++R
Sbjct: 162 YDANGLMINIDLT-HSLE--GEEVEKLVKLNKEAFPAKASHQKR 202


>AE014134-50|AAF51539.2|  500|Drosophila melanogaster CG3709-PA
           protein.
          Length = 500

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 3/224 (1%)
 Frame = +3

Query: 219 MDNKAIVKFCKEVGCCDICCLRYLGLKNPATYENYKEYILKYTXXXXXXXXXXXXXXITS 398
           M N+ +V++ +  G C+IC LRYL  +  A Y N  E + K                +  
Sbjct: 1   MKNQDLVEYLRSCGVCEICQLRYLKARG-AEYRNINETLQK--------------LDVKL 45

Query: 399 NSVDNINGNTDVNGCDDEXXXXXXXISICVSCFGILQEENWSECFNMVKETLEKKRYECS 578
           N  +N+  N ++   +         + +C +C G+  ++  +E  + +  + +  +Y+C 
Sbjct: 46  N--ENVE-NEELVISEGSQPSKRARLGVCSTCLGLFSKDFQNELLSSILAS-DFAKYDCQ 101

Query: 579 TFACALSAPIATLLRDKAIILHLSDAFK---DYKEDTLTPLKEAWKWTFGVKLAAQIXMT 749
               A+  P++  LR  A+   L   F    D       P+KEA K      +  ++   
Sbjct: 102 KIVLAICLPMSLQLRQLAMWFALRRRFGPSIDENNPPDVPIKEAVKLILHPIICEKLAKV 161

Query: 750 LDSGAISPVTDYT*YGVS**TQELEILKQLSPSLFXERRXXKRR 881
            D+  +    D T + +    +E+E L +L+   F  +   ++R
Sbjct: 162 YDANGLMINIDLT-HSLE--GEEVEKLVKLNKEAFPAKASHQKR 202


>AY094997-1|AAM11325.1|  441|Drosophila melanogaster AT11889p
           protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 504 LQEENWSECFNMVKETLEKKRYECSTFACALSAPIATLLRDKAIILHLSDAFKD 665
           +  E+W EC   +KE LE++R +    +  +S P ++  +D   I+     F++
Sbjct: 210 IDNEDWRECEKSLKEFLEQERAKMKERSLRISQPYSSDPQDIQNIVRARQKFRE 263


>AE014134-1333|AAF52552.2|  441|Drosophila melanogaster CG7196-PA,
           isoform A protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 504 LQEENWSECFNMVKETLEKKRYECSTFACALSAPIATLLRDKAIILHLSDAFKD 665
           +  E+W EC   +KE LE++R +    +  +S P ++  +D   I+     F++
Sbjct: 210 IDNEDWRECEKSLKEFLEQERAKMKERSLRISQPYSSDPQDIQNIVRARQKFRE 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,655,363
Number of Sequences: 53049
Number of extensions: 603518
Number of successful extensions: 1257
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)