Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_C17
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069420-1|AAL39565.1|  514|Drosophila melanogaster LD13436p pro...    29   6.5  
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    29   6.5  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    29   6.5  
AE013599-476|AAF59211.1|  514|Drosophila melanogaster CG12042-PA...    29   6.5  

>AY069420-1|AAL39565.1|  514|Drosophila melanogaster LD13436p
           protein.
          Length = 514

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 147 HPGPRDPSHMLGLVALQRRVXWHNVPLRCREC 52
           H  P D    +G +  QRR  W    LRCR+C
Sbjct: 261 HSQPADQPTAVGSLYPQRRSLWIKRSLRCRQC 292


>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster
          CG13492-PB, isoform B protein.
          Length = 2968

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 84 WHNVPLRCRECLNLKDXSIXGXVLR 10
          WH+ P+ C EC  L + S    VLR
Sbjct: 15 WHSGPINCYECSTLDECSAGSGVLR 39


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster
          CG13492-PA, isoform A protein.
          Length = 2931

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 84 WHNVPLRCRECLNLKDXSIXGXVLR 10
          WH+ P+ C EC  L + S    VLR
Sbjct: 15 WHSGPINCYECSTLDECSAGSGVLR 39


>AE013599-476|AAF59211.1|  514|Drosophila melanogaster CG12042-PA
           protein.
          Length = 514

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 147 HPGPRDPSHMLGLVALQRRVXWHNVPLRCREC 52
           H  P D    +G +  QRR  W    LRCR+C
Sbjct: 261 HSQPADQPTAVGSLYPQRRSLWIKRSLRCRQC 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,327,142
Number of Sequences: 53049
Number of extensions: 592920
Number of successful extensions: 1177
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)