Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C11
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0398 - 3515439-3515573,3515965-3516516 34 0.17
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 33 0.30
06_03_1298 + 29141578-29141623,29142129-29142250,29143818-291438... 33 0.30
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 33 0.30
02_03_0141 - 15649188-15649274,15649376-15649421,15650476-156506... 32 0.53
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 32 0.53
08_01_0242 - 2007601-2007677,2007792-2007843,2008117-2008188,200... 31 0.93
05_07_0172 - 28136987-28137124,28137458-28138009 31 1.2
02_03_0360 + 18104948-18106159 31 1.2
04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189 31 1.6
03_04_0245 + 19317741-19317947,19318895-19318966,19319790-19319795 31 1.6
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 30 2.1
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 29 4.9
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357... 29 6.5
11_06_0399 - 23129476-23129745,23131040-23131121,23131216-231317... 28 8.6
11_01_0772 - 6455042-6458107 28 8.6
04_01_0308 + 4188726-4190351 28 8.6
>08_01_0398 - 3515439-3515573,3515965-3516516
Length = 228
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Frame = +1
Query: 541 NEQQQEYRLKYLQAQQEVEELKRQLD--VIEFDNKQVSDQIQ--IEIQKVKMQFQEKLQE 708
NE Q E + + LQAQ ++E+LK+QL+ IE +K+ + I+ I +Q + + ++ + +
Sbjct: 93 NELQDEIQRQILQAQTDIEDLKKQLEQSKIERQHKEECEAIRKMISLQPPRSETEKLIAD 152
Query: 709 L 711
L
Sbjct: 153 L 153
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = +1
Query: 541 NEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKLQELAPL 720
N + L+Y Q+ + + L+ +L + D K+++D++ E+QK+ + + L
Sbjct: 246 NSDKDTSLLQYNQSTERLSTLESELSKAQDDLKKLTDEMATEVQKLSSAEARNSEIQSEL 305
Query: 721 PDLLKGAQIQLQEAKQLQR 777
L + ++Q +E +Q Q+
Sbjct: 306 EALDQKVKMQQEELEQKQK 324
>06_03_1298 +
29141578-29141623,29142129-29142250,29143818-29143874,
29143983-29144138,29144220-29144304,29144575-29144665,
29144807-29144971,29145064-29145186,29145334-29145409,
29145513-29145642,29145951-29147824,29148339-29148529,
29148697-29148860,29149164-29149275,29149276-29149294
Length = 1136
Score = 33.1 bits (72), Expect = 0.30
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Frame = +1
Query: 547 QQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSD-QIQIE-IQKVKMQFQEKLQE---- 708
QQQ+ +L LQ QQ++ ++ QL + Q++D Q+Q++ +QK++ Q Q L +
Sbjct: 565 QQQQQQL-LLQQQQQLSKMPAQLSSLANQQFQLTDQQLQLQLLQKLQQQQQSLLSQPAVT 623
Query: 709 LAPLPDLLKGAQIQLQEAKQL 771
LA LP + + ++ L +QL
Sbjct: 624 LAQLPLIQEQQKLLLDMQQQL 644
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +1
Query: 544 EQQQEYRLKYLQAQQEVEELKRQLDVIEFD---NKQVSDQIQIEIQKVKMQFQEKLQE 708
+QQQ+ + K LQ QQ+ L++Q + + + + Q Q+ Q++++Q +KLQ+
Sbjct: 554 QQQQQQQQKLLQQQQQQLLLQQQQQLSKMPAQLSSLANQQFQLTDQQLQLQLLQKLQQ 611
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = +1
Query: 541 NEQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKLQELAPL 720
N + L+Y Q+ + + L+ +L + D K+++D++ E+QK+ + + L
Sbjct: 467 NSDKDTSLLQYNQSTERLSTLESELSKAQDDLKKLTDEMATEVQKLSSAEARNSEIQSEL 526
Query: 721 PDLLKGAQIQLQEAKQLQR 777
L + ++Q +E +Q Q+
Sbjct: 527 EALDQKVKMQQEELEQKQK 545
>02_03_0141 -
15649188-15649274,15649376-15649421,15650476-15650606,
15652168-15652254,15652470-15652538,15652699-15652845,
15652923-15653003,15653122-15653223,15653392-15653429,
15653590-15653692,15653766-15653888,15654872-15654951,
15655356-15655504,15657794-15658010,15658379-15658448,
15659167-15659313,15659430-15659486,15663270-15663436,
15663479-15663569,15664044-15665081,15665580-15665695,
15666104-15667039,15667108-15667170,15667416-15667970,
15668293-15668305
Length = 1570
Score = 32.3 bits (70), Expect = 0.53
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 541 NEQQ-QEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKLQELAP 717
NEQ+ Q+ R +Y Q E +E K + + K++ D I IQ+ + + + K + P
Sbjct: 27 NEQRRQKDRERYAQMTNEDKENKLKRRREAYKRKKIEDSYCISIQEKRARARVKYNSMEP 86
Query: 718 LPDLLKGAQIQLQEAKQLQRLAED 789
K AQ+ A + +ED
Sbjct: 87 EQKQAKIAQVNANRAARRNTPSED 110
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 32.3 bits (70), Expect = 0.53
Identities = 24/92 (26%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Frame = +1
Query: 541 NEQQQEYRLKYLQAQQEVEELKRQLDV--IEFDNKQVSDQIQIE--IQKVKMQF-QEKLQ 705
++ QQE+ + QQE ++LKR +D+ +E N + Q++I+ +++ + +F Q+K +
Sbjct: 584 SKMQQEHASWLSKIQQERQDLKRDIDIQRVELLNSAKARQMEIDSYLREREEEFEQKKAK 643
Query: 706 ELAPLPDLLKGAQIQLQE-AKQLQRLAEDIRD 798
EL + + +L+ A +LQ+L ++ ++
Sbjct: 644 ELEHINSQKEMINTKLEHVAVELQKLKDERKE 675
>08_01_0242 -
2007601-2007677,2007792-2007843,2008117-2008188,
2008710-2009219
Length = 236
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 541 NEQQQEYRLKYLQAQQEV--EELKRQLDVIEFDNKQV 645
+E+ Q R+K LQA+ EV EL++QL+ E + KQV
Sbjct: 182 SEEDQLKRIKELQAENEVVGTELQKQLEAAELELKQV 218
>05_07_0172 - 28136987-28137124,28137458-28138009
Length = 229
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 541 NEQQQEYRLKYLQAQQEVEELKRQLD 618
NE Q E + + LQAQ ++EELK++L+
Sbjct: 93 NELQDEIQRQILQAQTDIEELKKKLE 118
>02_03_0360 + 18104948-18106159
Length = 403
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/53 (22%), Positives = 35/53 (66%)
Frame = +1
Query: 577 QAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKLQELAPLPDLLK 735
+A++ EEL+++ +++ ++ +++Q+++ + ++QF+EK + L D L+
Sbjct: 180 EAERAQEELEKEREMLRLADELREERVQMKLLEARLQFEEKNAVVEQLRDELE 232
>04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189
Length = 470
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/64 (20%), Positives = 37/64 (57%)
Frame = +1
Query: 544 EQQQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKLQELAPLP 723
E + E + ++ EEL+++ ++++ ++ ++Q+++ + ++QF+EK + L
Sbjct: 239 EDKAEVEALKKETEKAQEELQKEREMLQLADEWREQRVQMKLLEARLQFEEKNAAINQLH 298
Query: 724 DLLK 735
D L+
Sbjct: 299 DELQ 302
>03_04_0245 + 19317741-19317947,19318895-19318966,19319790-19319795
Length = 94
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -3
Query: 619 HPIVFSILRLLAVLVDTSICILVVVHFSLSESFSFPPIPLSIL 491
HP + +L LL VL+ S +LV+VH S S S PP S+L
Sbjct: 11 HPWLLDLLPLLIVLL-ISTHVLVLVHTSPSRESSRPPSGSSVL 52
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 568 KYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQE-KLQELAPLPDLLKGAQ 744
K A +E LK D +E ++++ ++ +E ++++ +E K QE+A L + L Q
Sbjct: 863 KLKMAARETGALKEAKDKLEKRVEELTWRLGLE-KRLRTDLEEAKAQEIAKLQETLHDMQ 921
Query: 745 IQLQEAKQL 771
Q++EAK +
Sbjct: 922 QQVEEAKAM 930
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = +1
Query: 550 QQEYRLKYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKLQELAPLPDL 729
QQ+ +L+ QQ++ + ++ L + + ++ Q Q+ Q+ + FQ++ Q++ L
Sbjct: 1063 QQQQQLQQQLLQQQLLQQQQYLSQMPQQQQNMTQQQQLFQQQQQQLFQQQQQQMVVLQQQ 1122
Query: 730 LKGAQIQLQEAKQLQR 777
+ IQ Q + LQ+
Sbjct: 1123 QQQQFIQQQMQQYLQQ 1138
>10_01_0326 +
3574129-3574329,3575144-3575692,3575914-3576072,
3576349-3577543,3577626-3577762,3578052-3578242,
3578888-3579218
Length = 920
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 541 NEQQQEYRL-KYLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKLQEL 711
NEQQQ++RL + Q Q + D ++ +Q Q Q ++Q+ + Q Q Q L
Sbjct: 446 NEQQQQHRLDEQHQRQDHQPKQNHPHDELQHQKQQPEQQQQDQVQQQQQQEQPHDQHL 503
>11_06_0399 -
23129476-23129745,23131040-23131121,23131216-23131711,
23132135-23132699,23132825-23132893
Length = 493
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 574 LQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQFQEKL-QELAPLPDLLK--GAQ 744
++ Q+E +++ +++ + S +++++IQK++ +EKL + + + + A
Sbjct: 376 IRYQREEAKIQAWINLESAKAEAQSRKLEVKIQKMRSNLEEKLMRRMTTVHRRAEEWRAT 435
Query: 745 IQLQEAKQLQRLAEDIR 795
Q Q +QL+R AE +R
Sbjct: 436 AQAQHLQQLKRAAEQVR 452
>11_01_0772 - 6455042-6458107
Length = 1021
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +1
Query: 175 VSAYLLELYFKESEYLESTDSGFGESVNK---ASEER-SCNLTQITKLREELIRA 327
V A L +L ++ E T G G+SVNK AS+E ++Q+ +L++EL +A
Sbjct: 232 VEALLRKLLWEIRRRCELTTPGDGDSVNKEQQASDETDKLEVSQLKELKDELKKA 286
>04_01_0308 + 4188726-4190351
Length = 541
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 571 YLQAQQEVEELKRQLDVIEFDNKQVSDQIQIEIQKVKMQ---FQEKLQELAPLPDLLKGA 741
Y Q++ EVE+ +++L + + + + + +K+KM+ + +L+E+ D +K
Sbjct: 66 YSQSEAEVEQFQKELGALVEEKEVAAKTFDDDKEKMKMESEYLKRRLEEIHDNKDFMKTE 125
Query: 742 QIQLQ 756
+LQ
Sbjct: 126 NNKLQ 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,586,264
Number of Sequences: 37544
Number of extensions: 293983
Number of successful extensions: 1066
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -