BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C09
(895 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023633-1|AAY85033.1| 112|Drosophila melanogaster IP05674p pro... 148 9e-36
AE014297-4223|AAF56781.1| 111|Drosophila melanogaster CG17856-P... 148 9e-36
AY113594-1|AAM29599.1| 111|Drosophila melanogaster RH44664p pro... 146 3e-35
AE014298-2348|AAF48576.1| 111|Drosophila melanogaster CG3560-PA... 146 3e-35
BT021433-1|AAX33581.1| 378|Drosophila melanogaster GH20159p pro... 30 4.9
AY217028-1|AAO37650.1| 278|Drosophila melanogaster DIP1-d splic... 30 4.9
AY121664-1|AAM51991.1| 378|Drosophila melanogaster RE10847p pro... 30 4.9
AJ250870-4|CAC17711.1| 409|Drosophila melanogaster chromatin co... 30 4.9
AJ250870-3|CAC17710.1| 394|Drosophila melanogaster chromatin co... 30 4.9
AJ250870-2|CAC17709.1| 395|Drosophila melanogaster chromatin co... 30 4.9
AJ250870-1|CAC17708.1| 410|Drosophila melanogaster chromatin co... 30 4.9
AJ250869-1|CAC17707.1| 395|Drosophila melanogaster chromatin co... 30 4.9
AJ250868-1|CAC17706.1| 410|Drosophila melanogaster chromatin co... 30 4.9
AJ250867-1|CAC17705.1| 394|Drosophila melanogaster chromatin co... 30 4.9
AJ250866-1|CAC17704.1| 409|Drosophila melanogaster chromatin co... 30 4.9
AF218310-1|AAF67101.1| 410|Drosophila melanogaster Ultrabithora... 30 4.9
AF213338-1|AAF25886.1| 374|Drosophila melanogaster disco intera... 30 4.9
AF182444-3|AAF03831.1| 309|Drosophila melanogaster disco-intera... 30 4.9
AF182444-2|AAF03832.1| 395|Drosophila melanogaster disco-intera... 30 4.9
AF182444-1|AAF03833.1| 410|Drosophila melanogaster disco-intera... 30 4.9
AF182154-1|AAD56033.1| 395|Drosophila melanogaster dsRBD-contai... 30 4.9
AF175713-1|AAD50503.1| 309|Drosophila melanogaster dsRBD-contai... 30 4.9
AF175712-3|AAD50504.1| 309|Drosophila melanogaster dsRBD-contai... 30 4.9
AF175712-2|AAD50506.1| 395|Drosophila melanogaster dsRBD-contai... 30 4.9
AF175712-1|AAD50505.1| 410|Drosophila melanogaster dsRBD-contai... 30 4.9
AF175711-1|AAD50502.1| 410|Drosophila melanogaster dsRBD-contai... 30 4.9
AE014298-3169|AAN09008.1| 409|Drosophila melanogaster CG17686-P... 30 4.9
AE014298-3168|AAF45390.2| 409|Drosophila melanogaster CG17686-P... 30 4.9
AE014298-3167|AAN09007.1| 410|Drosophila melanogaster CG17686-P... 30 4.9
AE014298-3166|AAN09006.1| 395|Drosophila melanogaster CG17686-P... 30 4.9
AE014297-2713|AAF55703.2| 1038|Drosophila melanogaster CG4583-PA... 29 6.5
>BT023633-1|AAY85033.1| 112|Drosophila melanogaster IP05674p
protein.
Length = 112
Score = 148 bits (359), Expect = 9e-36
Identities = 64/96 (66%), Positives = 78/96 (81%)
Frame = +2
Query: 254 LSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTIL 433
L KWAYN+SGFN+YGL RDDCL+E DV EA+RRLP + DERN+RI+RA+ LSM KTIL
Sbjct: 17 LGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTKTIL 76
Query: 434 PKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKEY 541
PKE+WTKYEED YL P + +V+KER ERE+W K +
Sbjct: 77 PKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 112
>AE014297-4223|AAF56781.1| 111|Drosophila melanogaster CG17856-PA
protein.
Length = 111
Score = 148 bits (359), Expect = 9e-36
Identities = 64/96 (66%), Positives = 78/96 (81%)
Frame = +2
Query: 254 LSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTIL 433
L KWAYN+SGFN+YGL RDDCL+E DV EA+RRLP + DERN+RI+RA+ LSM KTIL
Sbjct: 16 LGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTKTIL 75
Query: 434 PKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKEY 541
PKE+WTKYEED YL P + +V+KER ERE+W K +
Sbjct: 76 PKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 111
>AY113594-1|AAM29599.1| 111|Drosophila melanogaster RH44664p
protein.
Length = 111
Score = 146 bits (355), Expect = 3e-35
Identities = 65/95 (68%), Positives = 78/95 (82%)
Frame = +2
Query: 251 SLSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTI 430
+L +WAYNLSGFN+YGL RDDCL+E DV EA+RRLP + DERN+RI+RA+ LSM KTI
Sbjct: 15 NLGRWAYNLSGFNQYGLHRDDCLYENEDVKEAVRRLPRKLYDERNYRIMRALHLSMTKTI 74
Query: 431 LPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEK 535
LPKE+WTKYEED YL P +++V KER ERE WEK
Sbjct: 75 LPKEQWTKYEEDVKYLEPYLKEVVKEREEREDWEK 109
>AE014298-2348|AAF48576.1| 111|Drosophila melanogaster CG3560-PA
protein.
Length = 111
Score = 146 bits (355), Expect = 3e-35
Identities = 65/95 (68%), Positives = 78/95 (82%)
Frame = +2
Query: 251 SLSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTI 430
+L +WAYNLSGFN+YGL RDDCL+E DV EA+RRLP + DERN+RI+RA+ LSM KTI
Sbjct: 15 NLGRWAYNLSGFNQYGLHRDDCLYENEDVKEAVRRLPRKLYDERNYRIMRALHLSMTKTI 74
Query: 431 LPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEK 535
LPKE+WTKYEED YL P +++V KER ERE WEK
Sbjct: 75 LPKEQWTKYEEDVKYLEPYLKEVVKEREEREDWEK 109
>BT021433-1|AAX33581.1| 378|Drosophila melanogaster GH20159p
protein.
Length = 378
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 320 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 348
>AY217028-1|AAO37650.1| 278|Drosophila melanogaster DIP1-d splice
isoform protein.
Length = 278
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 220 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 248
>AY121664-1|AAM51991.1| 378|Drosophila melanogaster RE10847p
protein.
Length = 378
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 320 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 348
>AJ250870-4|CAC17711.1| 409|Drosophila melanogaster chromatin
component KLETT protein.
Length = 409
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 351 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 379
>AJ250870-3|CAC17710.1| 394|Drosophila melanogaster chromatin
component KLETT protein.
Length = 394
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 336 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 364
>AJ250870-2|CAC17709.1| 395|Drosophila melanogaster chromatin
component KLETT protein.
Length = 395
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 337 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 365
>AJ250870-1|CAC17708.1| 410|Drosophila melanogaster chromatin
component KLETT protein.
Length = 410
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 352 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 380
>AJ250869-1|CAC17707.1| 395|Drosophila melanogaster chromatin
component KLETT protein.
Length = 395
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 337 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 365
>AJ250868-1|CAC17706.1| 410|Drosophila melanogaster chromatin
component KLETT protein.
Length = 410
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 352 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 380
>AJ250867-1|CAC17705.1| 394|Drosophila melanogaster chromatin
component KLETT protein.
Length = 394
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 336 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 364
>AJ250866-1|CAC17704.1| 409|Drosophila melanogaster chromatin
component KLETT protein.
Length = 409
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 351 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 379
>AF218310-1|AAF67101.1| 410|Drosophila melanogaster Ultrabithorax
binding protein 1 protein.
Length = 410
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 352 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 380
>AF213338-1|AAF25886.1| 374|Drosophila melanogaster disco
interacting protein isoformTO67 protein.
Length = 374
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 320 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 348
>AF182444-3|AAF03831.1| 309|Drosophila melanogaster
disco-interacting protein protein.
Length = 309
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 251 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 279
>AF182444-2|AAF03832.1| 395|Drosophila melanogaster
disco-interacting protein protein.
Length = 395
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 337 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 365
>AF182444-1|AAF03833.1| 410|Drosophila melanogaster
disco-interacting protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 352 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 380
>AF182154-1|AAD56033.1| 395|Drosophila melanogaster
dsRBD-containing protein dip1-b splice isoform protein.
Length = 395
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 337 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 365
>AF175713-1|AAD50503.1| 309|Drosophila melanogaster
dsRBD-containing protein dip1-a splice isoform protein.
Length = 309
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 251 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 279
>AF175712-3|AAD50504.1| 309|Drosophila melanogaster
dsRBD-containing protein dip1-a protein.
Length = 309
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 251 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 279
>AF175712-2|AAD50506.1| 395|Drosophila melanogaster
dsRBD-containing protein dip1-b protein.
Length = 395
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 337 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 365
>AF175712-1|AAD50505.1| 410|Drosophila melanogaster
dsRBD-containing protein dip1-c protein.
Length = 410
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 352 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 380
>AF175711-1|AAD50502.1| 410|Drosophila melanogaster
dsRBD-containing protein dip1-c splice isoform protein.
Length = 410
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 352 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 380
>AE014298-3169|AAN09008.1| 409|Drosophila melanogaster CG17686-PB,
isoform B protein.
Length = 409
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 351 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 379
>AE014298-3168|AAF45390.2| 409|Drosophila melanogaster CG17686-PA,
isoform A protein.
Length = 409
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 351 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 379
>AE014298-3167|AAN09007.1| 410|Drosophila melanogaster CG17686-PD,
isoform D protein.
Length = 410
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 352 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 380
>AE014298-3166|AAN09006.1| 395|Drosophila melanogaster CG17686-PC,
isoform C protein.
Length = 395
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 401 HVQYGSFSRQQHGMEVCGVLQLHQEFHAS 315
+V YGS + +GM+ G++ +QEFHA+
Sbjct: 337 YVDYGSSGDKTNGMQHLGIMVDNQEFHAN 365
>AE014297-2713|AAF55703.2| 1038|Drosophila melanogaster CG4583-PA
protein.
Length = 1038
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 360 HPMLLTRETSVLYVPYSSPCKKQSYLKKSGQ--NMKKIPYT*PQLLS 494
+P ++ + VP+ P + + + GQ ++KK+PYT PQL++
Sbjct: 17 YPPIVAEHQENVQVPHFLPDPRDGSIYQLGQMGSLKKLPYTIPQLVA 63
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,703,820
Number of Sequences: 53049
Number of extensions: 455976
Number of successful extensions: 1408
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -