Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_C07
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49...    30   2.8  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   3.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
06_01_1042 + 8187536-8187616,8187713-8188315                           28   8.6  
03_01_0168 + 1382531-1383931,1384028-1384150                           28   8.6  
02_03_0099 + 15206282-15206917                                         28   8.6  

>12_01_0059 +
           494876-494924,496060-496211,496344-496531,496971-497027,
           497123-497282,497389-497457,497712-497837,497972-498091
          Length = 306

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 351 SSQRWRNPTGL*RYQAFPPGKLPRALSXFRPCRLPD 458
           SS+ + +P G+  +  FP   LP A S ++P  LP+
Sbjct: 22  SSRNYVSPQGILEFYNFPIPSLPSASSNYQPSSLPE 57


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 357 QRWRN--PTGL*RYQAFPPGKLPRALSXFRPC--RLPDTCPPFSLREAWRFLIAHAVGIS 524
           Q+WR+  PTG   + +FP G LP A    +P   R P T P F  R A      + + + 
Sbjct: 27  QQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPAT-PLFPSRVAEGLFGLNGIEVG 85

Query: 525 VRCRSFAP 548
           +   +F P
Sbjct: 86  IEGDNFTP 93


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 73  NESAN---ARGEAVCVLGALPLPRSLTRCAR 156
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_01_1042 + 8187536-8187616,8187713-8188315
          Length = 227

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 529 RTEIPTA*AMRKRHASRREKGGQVSGKRQGRXQESARGSXPGGNAWY 389
           RTE   A  +  R A   E+G +  G R+ R +   RGS   G +W+
Sbjct: 63  RTERERA-PLAARPAGEEEEGRRAGGWRRRRRRRQRRGSRSLGGSWW 108


>03_01_0168 + 1382531-1383931,1384028-1384150
          Length = 507

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 600 SGNYRLESNPVRHDLSPLGSSHWLTGLAERG-M*AGATEFLK-WW 728
           +GN R +S+P   D +P G  H + G+A    +     E+++ WW
Sbjct: 65  AGNRRNDSSPPSDDAAPTGLGHIVFGIAASSELWKSRREYIRTWW 109


>02_03_0099 + 15206282-15206917
          Length = 211

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 282 KGRGCWRFSIGSAPLXEHHKNRRSSQRW 365
           KG       +G  P  ++H++RRS+ RW
Sbjct: 167 KGVEVLHVGVGKGPSLQNHRDRRSTSRW 194


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,506,979
Number of Sequences: 37544
Number of extensions: 536781
Number of successful extensions: 1497
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)