Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C06
(881 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0392 + 17131839-17131943,17134182-17134258,17134385-171344... 86 3e-17
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 82 7e-16
07_03_0945 - 22791754-22791863,22792295-22792367,22792457-227925... 81 9e-16
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 81 9e-16
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 73 2e-13
08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316 71 1e-12
02_05_0743 + 31425827-31425888,31426733-31426759,31426840-314269... 70 2e-12
10_02_0078 - 4992019-4992594,4993156-4993248,4995984-4996202,499... 70 3e-12
06_01_0865 - 6571056-6571190,6571737-6571977,6572279-6572401,657... 68 9e-12
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 66 4e-11
09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416 64 2e-10
09_06_0070 - 20670387-20670473,20672418-20672645,20673388-206735... 61 1e-09
11_01_0354 + 2665570-2665601,2665796-2665894,2667158-2667202,266... 49 4e-06
12_01_0375 + 2930807-2930838,2930936-2930999,2931127-2931333,293... 33 0.30
08_02_0501 + 17836948-17837373,17837857-17839184,17839270-178393... 29 4.9
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 28 8.6
08_01_0789 + 7640021-7640382,7643435-7643480,7644514-7644638,764... 28 8.6
01_05_0148 + 18609853-18610058,18610347-18612669 28 8.6
>11_04_0392 +
17131839-17131943,17134182-17134258,17134385-17134411,
17134512-17134634,17134738-17134981,17135081-17135098
Length = 197
Score = 86.2 bits (204), Expect = 3e-17
Identities = 33/88 (37%), Positives = 57/88 (64%)
Frame = +3
Query: 306 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 485
++ +YP Y S++A+ESP K DD +WL YW++Y+ ++VE + ++ W P+++ LK +F
Sbjct: 63 TVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYELKLLF 122
Query: 486 VIWCYLPTEYNGSLVIYYRIIRPYYQKH 569
+ W LP + G+ IY R +R +KH
Sbjct: 123 IAWLALP-NFRGAAFIYNRFVREQLRKH 149
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 81.8 bits (193), Expect = 7e-16
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +3
Query: 309 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 488
+ YP Y S+KA+E+ DD +WLTYWV+Y+ ++ E I+ W P + +K IF+
Sbjct: 22 VALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFI 81
Query: 489 IWCYLPTEYNGSLVIYYRIIRPYYQKH 569
W LP +NG+ +Y +RP + KH
Sbjct: 82 CWLVLP-YFNGAAFVYQNYVRPMFVKH 107
>07_03_0945 -
22791754-22791863,22792295-22792367,22792457-22792552,
22793268-22793331,22793957-22794008,22794525-22794622,
22795108-22795166,22795981-22796013
Length = 194
Score = 81.4 bits (192), Expect = 9e-16
Identities = 34/101 (33%), Positives = 57/101 (56%)
Frame = +3
Query: 306 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 485
+IG P Y + +A+E + + +WL YW Y FSI E F+D I+ P Y+ +K
Sbjct: 33 AIGVGLPVYSTFRAIEKKDQKEKERWLLYWAAYGSFSIAEIFADQILSSVPFYYHVKFAI 92
Query: 486 VIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTASR 608
++W P+ +G+ +Y R +RP++ KH +ID + N S+
Sbjct: 93 LVWLQFPSN-SGAKHVYRRYMRPFFLKHQAKIDRILNILSK 132
>01_06_0575 - 30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 81.4 bits (192), Expect = 9e-16
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = +3
Query: 294 LICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLL 473
L+ I +YP Y SM+A+ESP DD +WLTYWV+Y+ ++ E ++ WFPL+ +
Sbjct: 897 LVGPGIMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSLITLFELSCWKVLQWFPLWPYM 956
Query: 474 KCIFVIWCYLPTEYNGSLVIYYRIIRPYYQ 563
K +F W LP +NG+ IY +R Y++
Sbjct: 957 KLLFCCWLVLPI-FNGAAYIYETHVRRYFK 985
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +3
Query: 255 FTGLYLVFGFGAELICNSIGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEY 428
F + L+ + + + G+ YPAY K +E P+ + W YW++ A +++E
Sbjct: 49 FYNVSLIMSRRSRCVLLAFGYAYPAYECYKTVELNKPEIEQLIFWCQYWILVALMTVMER 108
Query: 429 FSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 584
F DF + W P Y K +F I+ + P + G+ IY RPY +H ID
Sbjct: 109 FGDFTISWLPFYSEAKLMFFIYLWYP-KTKGTTYIYGTFFRPYISQHENEID 159
>08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316
Length = 127
Score = 70.9 bits (166), Expect = 1e-12
Identities = 26/77 (33%), Positives = 51/77 (66%)
Frame = +3
Query: 348 LESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSL 527
+ESP K DD +WL YW++Y+ +++E ++ ++ W P+++ +K +FV W LP ++ G+
Sbjct: 1 MESPTKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVWYPVKVLFVAWLVLP-QFKGAS 59
Query: 528 VIYYRIIRPYYQKHHGR 578
IY +++R +K+ R
Sbjct: 60 FIYKKLVREQLRKYRAR 76
>02_05_0743 +
31425827-31425888,31426733-31426759,31426840-31426962,
31427252-31427492,31427655-31427780
Length = 192
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +3
Query: 309 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 488
+ YP Y S++A+E+ DD +WLTYWV+Y+ ++ E ++ W PL+ K F
Sbjct: 24 VSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFSPVLEWLPLWSYAKLFFN 83
Query: 489 IWCYLPTEYNGSLVIYYRIIRP 554
W LP +NG+ +Y +RP
Sbjct: 84 CWLVLP-YFNGAAHVYEHFVRP 104
>10_02_0078 -
4992019-4992594,4993156-4993248,4995984-4996202,
4996282-4996345,4996429-4996485,4996573-4996671,
4997296-4997327
Length = 379
Score = 69.7 bits (163), Expect = 3e-12
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 FGAELICNSIGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWF 455
F + ++ + G+ YPAY K +E P+ + W YW++ A +++E F DF + W
Sbjct: 5 FLSRVLLLAFGYAYPAYECYKTVELNKPEIEKLIFWCQYWILVALLTVLERFGDFAISWL 64
Query: 456 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 584
PLY K +F I+ + P G+ +Y RPY ++ ID
Sbjct: 65 PLYSEAKLMFFIYLWCP-RTKGTSYVYETFFRPYISQYENDID 106
>06_01_0865 -
6571056-6571190,6571737-6571977,6572279-6572401,
6572501-6572527,6573954-6574009
Length = 193
Score = 68.1 bits (159), Expect = 9e-12
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 309 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 488
+ YP Y S++A+E+ DD +WLTYWV+Y+ ++ E ++ W P + K F
Sbjct: 22 VSLAYPLYASVRAIETKSPVDDQQWLTYWVLYSFITLFELTFAPVIEWLPFWSYAKLFFN 81
Query: 489 IWCYLPTEYNGSLVIYYRIIRPYY 560
W LP ++G+ +Y +RP +
Sbjct: 82 CWLVLPC-FHGAAYVYDHFVRPMF 104
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +3
Query: 309 IGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 482
+G+ YPAY K +E P+ + W YW++ A ++ E D V W P+Y K
Sbjct: 14 LGYAYPAYDCYKTVELNRPEVEQLRFWCQYWILLAVLTVFERVGDNFVSWLPMYSEAKLA 73
Query: 483 FVIWCYLP--TEYNGSLVIYYRIIRPYYQKHHGRID 584
F+++ + P + G+ +Y +PY KH ID
Sbjct: 74 FIVYLWYPKTQHFQGTSYVYESFFKPYIGKHEAEID 109
>09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416
Length = 98
Score = 63.7 bits (148), Expect = 2e-10
Identities = 25/80 (31%), Positives = 48/80 (60%)
Frame = +3
Query: 348 LESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSL 527
+ES K DD +WL YW++Y+ +++E ++ W PL++ K +FV W LP ++ G+
Sbjct: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLP-QFRGAS 59
Query: 528 VIYYRIIRPYYQKHHGRIDD 587
IY + +R +K+ ++ +
Sbjct: 60 FIYDKFVREQLKKNRVKLHE 79
>09_06_0070 -
20670387-20670473,20672418-20672645,20673388-20673508,
20673604-20673702,20673802-20673833
Length = 188
Score = 61.3 bits (142), Expect = 1e-09
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +3
Query: 309 IGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 482
+G+ YPAY K LE PQ D W YW++ A + +E + F V W P+Y K
Sbjct: 14 LGYAYPAYDCYKTLELNKPQIDQLRFWCQYWILLAFLTTLETITYFTVSWLPMYGEAKLA 73
Query: 483 FVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 584
V++ + P + G+ +Y ++P +H ID
Sbjct: 74 LVLYLWYP-KTRGAKHVYESYLQPVLARHEADID 106
>11_01_0354 +
2665570-2665601,2665796-2665894,2667158-2667202,
2667293-2667356,2667497-2667709,2669960-2670160
Length = 217
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/91 (28%), Positives = 43/91 (47%)
Frame = +3
Query: 312 GFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 491
G+ PA+ K LE+ + DD L +W Y + + V W P+Y +K F +
Sbjct: 15 GYAMPAFECFKTLET--RPDDAHMLRFWCQYWIIVSMVIACESFVSWMPMYGEIKLAFFV 72
Query: 492 WCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 584
+ + P + GS V+Y IRP ++ I+
Sbjct: 73 YLWYP-KTKGSDVVYDSFIRPTVMQYEPNIE 102
>12_01_0375 +
2930807-2930838,2930936-2930999,2931127-2931333,
2932385-2932458,2932831-2932858,2933268-2933456
Length = 197
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 441 IVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 584
++ W P+Y +K F ++ + P + GS V+Y +RP ++ I+
Sbjct: 8 LISWMPMYGEIKLAFFVYLWYP-KTKGSDVVYDTFLRPIVMQYEPNIE 54
>08_02_0501 + 17836948-17837373,17837857-17839184,17839270-17839380,
17839719-17839998,17840275-17840396,17840451-17840556,
17840814-17841020,17841130-17841255,17841719-17841817,
17842265-17842456,17842555-17843073
Length = 1171
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +3
Query: 381 WLTYWVVYACFSIVEYFSDFIVGW-----FPLYWLLKCIFVIWCYLP 506
W T+ V+Y F S + V W PLYWL + V+ +P
Sbjct: 1095 WYTFLVIYGSFPPTISTSAYHVFWEACASSPLYWLSTLVIVVTALIP 1141
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 429 FSDFIVGWFPLYWLLKCIFVI 491
+S+ IV WFP++ CIFVI
Sbjct: 84 YSNGIVQWFPVFEYWSCIFVI 104
>08_01_0789 +
7640021-7640382,7643435-7643480,7644514-7644638,
7645028-7645092,7647642-7648186
Length = 380
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 450 WFPLYWLLKCIFVIWCYL--PTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTASRLVADT 623
W P+ +L + V+W YL P +Y + +Y +R ++ R TA+R+V
Sbjct: 250 WIPVILILVAVTVLWIYLYPPQDYTYPVRDWYP-VRDWFPAEPARELTDEETAARVVFRQ 308
Query: 624 IRKT 635
I T
Sbjct: 309 ILST 312
>01_05_0148 + 18609853-18610058,18610347-18612669
Length = 842
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 532 ITRDPLYSVGR*HQITKMHFNSQYNGNQ 449
+ DPL S+ R +T++HF YNG +
Sbjct: 714 LKEDPLPSLSRLLNLTELHFTRAYNGEK 741
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,571,857
Number of Sequences: 37544
Number of extensions: 474896
Number of successful extensions: 1211
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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