Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C06
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 170 1e-42
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 127 9e-30
AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical... 114 7e-26
U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 56 3e-08
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 42 4e-04
L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 38 0.013
AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine r... 32 0.47
Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 31 1.4
U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical pr... 30 2.5
U39472-1|AAK31395.1| 534|Caenorhabditis elegans Cytochrome p450... 29 3.3
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 3.3
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 28 7.7
>AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical
protein Y71F9B.3 protein.
Length = 183
Score = 170 bits (414), Expect = 1e-42
Identities = 77/164 (46%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Frame = +3
Query: 123 KLQEYKDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELIC 302
++Q+ D++++ L++ S T EQK GV RL++ LG+V LYL+FG A+L+C
Sbjct: 6 QVQKVLDDVDKQLHEPSTV-TNVLATVEQKTGVKRLHLVLGVVGLQALYLIFGHSAQLVC 64
Query: 303 NSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 482
N +GFVYPAYMS+KA+ES K+DDT+WLTYWV++A S+VE+FS IV FP+YWL K I
Sbjct: 65 NFMGFVYPAYMSIKAIESSNKEDDTQWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKSI 124
Query: 483 FVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID-DMANTASRL 611
F+++ YLP+ + G+ +Y+R ++P +H G ID + N A R+
Sbjct: 125 FLLYLYLPS-FLGAAKLYHRFVKPVAARHSGSIDAKIGNFADRV 167
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 127 bits (307), Expect = 9e-30
Identities = 52/118 (44%), Positives = 80/118 (67%)
Frame = +3
Query: 204 EQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKW 383
E G+ R + GL+ +Y++ G GAE +CN IG YPAY+S+KA+ + DDDT W
Sbjct: 49 EDATGLKREMLAYGLIGLNCVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMW 108
Query: 384 LTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 557
L YW V+ FSI+++F+ I+ +FP+YW+ K F+++ YLP E +GS VIY+++I P+
Sbjct: 109 LIYWTVFGAFSIIDFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHVIYHQLIDPF 165
>AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical
protein F56B3.6 protein.
Length = 205
Score = 114 bits (275), Expect = 7e-26
Identities = 51/108 (47%), Positives = 71/108 (65%)
Frame = +3
Query: 231 YIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYAC 410
Y GL+AF +LVFG A L+CN IGF YP Y S+KA+ SP DDDT WL YW +A
Sbjct: 84 YAAFGLIAF---FLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTCFAV 140
Query: 411 FSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 554
+V++FS+ I+ WFP Y++ K F+++ YLP + GS++ Y I+ P
Sbjct: 141 LYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVMFYETIVDP 187
>U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical
protein T19C3.4 protein.
Length = 229
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +3
Query: 288 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVG-WFPLY 464
+ L+ + G +YPAY S KA+ + + KW+ YW+V+A +S +E D ++ WFP Y
Sbjct: 6 SRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFY 65
Query: 465 WLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 602
+ LK +F+ W P G+ ++Y + + P +H ID + +A
Sbjct: 66 FQLKIVFIFWLLSPWT-KGASILYRKWVHPTLNRHEKDIDALLESA 110
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 282 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYF-SDFIVGWF- 455
F A + N IG V P S K L+ P K + + YW +Y F IV++F S F V F
Sbjct: 3 FLARGLSNLIGIVAPVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCFI 62
Query: 456 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMA 593
P Y F + +P + V+Y + + P+ +K+ RID+++
Sbjct: 63 PFYDFFILTFTVLMAIP-HIGFASVLYTKFLAPFLRKYERRIDNIS 107
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 234 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYA 407
IF+ + LYL+ G A+++C ++ V PA S K L +P+ K+ L YW +Y
Sbjct: 74 IFVMTMISVALYLIEGEHAQVVCTALTSVPPAIFSYKVLMNPKSSKEGYHSILFYWTLYG 133
Query: 408 CFSIVEYF 431
++++ F
Sbjct: 134 ILAVIDQF 141
>L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical
protein C06E1.1 protein.
Length = 161
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +3
Query: 114 MASKLQEYKDNIEQSLNDKSKP-WT-KYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFG 287
MA+ + + + I + L ++K W K F AE+ G+ R I +Y++ G
Sbjct: 1 MATIIAKIESKINEYLKARNKEDWKEKTFTQAEKFSGIPRERIVSMAFLMLSIYVLLGNF 60
Query: 288 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEY 428
L + I +P S L QK+ L YW++YA S+ +Y
Sbjct: 61 LPLFSHIICIFWPVKESFMILRQ-QKNPSDNILLYWILYAMVSLFDY 106
>AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical
protein Y23H5A.4 protein.
Length = 380
Score = 37.5 bits (83), Expect = 0.013
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 204 EQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDD--T 377
E VG L I L LYL+ G A+ IC ++ V PA S + L + D
Sbjct: 52 EGLVGTKELVILSALTMC--LYLINGEYAQTICTALTSVPPALFSYRVLTNQMTDKQGYH 109
Query: 378 KWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKC 479
L YW +Y ++++ F+ G Y L KC
Sbjct: 110 SILFYWTLYGLTALIDQFAGTAQG----YNLCKC 139
>AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine
receptor, class i protein46 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/125 (19%), Positives = 54/125 (43%)
Frame = +3
Query: 240 LGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 419
+G++ FTG+++VF A +++ + A ++ A ++ K L + +C +
Sbjct: 209 VGVMGFTGIFVVFQAIAMTTMDTMKMLKGARKTISAQSYDRQRSAMKSLIAQFLASCLLV 268
Query: 420 VEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANT 599
+ S +++ +P+ + + + + T + + VI PY GRI
Sbjct: 269 LPAASFYVISVYPINYGQEIVNISMAIFATRSSVNAVILVATTPPYRAFLFGRIASSRQK 328
Query: 600 ASRLV 614
A+ V
Sbjct: 329 AASTV 333
>Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical
protein W01D2.3 protein.
Length = 243
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Frame = +3
Query: 192 FELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 371
F E+ G R + F G + ++ I + + P +M++ A+ S +
Sbjct: 88 FREIERVFGRRREHCFYGALGVLLTLVLLNDAVGAITAFMTLIIPTFMTVTAISSTSSYE 147
Query: 372 DTKWLT--------YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 497
+ +L YW VYA F E F ++ W L + IF+ C
Sbjct: 148 NPSFLKNHQDFFVRYWTVYAVFVTGESFLSSLIHWD--LRLFRLIFMSMC 195
>Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical
protein F54B3.2 protein.
Length = 389
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 422 GVLFRFHRRLVSIVLAVKVHLRDLVLPAD*IQRVPRDLLPYHSS--LLPEASWSYR*YGQ 595
GV F FHRR S+V ++ + + +L + L+PY + LP ASW YR G+
Sbjct: 182 GVQFEFHRR--SVVSKIQKTI-EFMLKLNNQTSTYSQLIPYWNPTIFLPPASWQYRKLGE 238
>U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical
protein T10E9.6 protein.
Length = 142
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 390 YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP 506
YW ++ F Y D I+ + PLY+++K I +LP
Sbjct: 91 YWTIFGFF----YLFDRILEYIPLYYIIKLAVFIGLFLP 125
>U39472-1|AAK31395.1| 534|Caenorhabditis elegans Cytochrome p450
family protein 23A1 protein.
Length = 534
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 668 LKHMKKRAGLIGLSDGICHQTGSCVGHIIDTTMMLLVVRTN 546
+ HM+K GL G +C CVG+II+ ML +R N
Sbjct: 182 MNHMEKSCGLDGKELHLCPSIAVCVGNIINN--MLFGLRFN 220
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 393 WVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV--IWCY 500
++ AC +S GW +YWLL C+ + +W Y
Sbjct: 110 FIYRACVLARPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
F33C8.1b protein.
Length = 1234
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 456 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTASRLVADT 623
P+ W+L + C++ L+ ++ Y+++ RID++ + ASR A T
Sbjct: 1135 PINWVLFFVIFAACFIVLLVVAGLLWMIKVRIEAYRRNQRRIDEIEHMASRPFAST 1190
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
F33C8.1a protein.
Length = 1271
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 456 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTASRLVADT 623
P+ W+L + C++ L+ ++ Y+++ RID++ + ASR A T
Sbjct: 1172 PINWVLFFVIFAACFIVLLVVAGLLWMIKVRIEAYRRNQRRIDEIEHMASRPFAST 1227
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
Length = 1329
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 456 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTASRLVADT 623
P+ W+L + C++ L+ ++ Y+++ RID++ + ASR A T
Sbjct: 1172 PINWVLFFVIFAACFIVLLVVAGLLWMIKVRIEAYRRNQRRIDEIEHMASRPFAST 1227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,332,155
Number of Sequences: 27780
Number of extensions: 443177
Number of successful extensions: 1352
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -