Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C05
(935 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 193 2e-49
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 131 8e-31
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 126 2e-29
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 126 2e-29
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 126 2e-29
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 124 9e-29
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 100 2e-21
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 1.6
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 30 2.1
AF025472-2|AAB71074.2| 625|Caenorhabditis elegans Hypothetical ... 30 2.7
AF025472-1|AAY43980.1| 832|Caenorhabditis elegans Hypothetical ... 30 2.7
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 29 6.3
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 29 6.3
U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical pr... 29 6.3
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 8.3
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 28 8.3
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 28 8.3
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 28 8.3
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 193 bits (470), Expect = 2e-49
Identities = 95/187 (50%), Positives = 134/187 (71%)
Frame = +1
Query: 184 SSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAK 363
++A S I NVT+IG GLMGSGIAQVSA A NVT+VD + AL KA++ I +L RVAK
Sbjct: 15 TTAQLSKINNVTIIGAGLMGSGIAQVSANAKLNVTVVDSNQSALEKAQQGIANSLKRVAK 74
Query: 364 KMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAP 543
K + D+ V+ L RI +T+ +++ K ADLV+EAIVENI +K KLF +++ A
Sbjct: 75 KKHADDAAAQTALVSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEVEVAAK 134
Query: 544 SHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMME 723
T+ +NTSSL + +I +K K +FGGLHFFNPVP+M+LLEVV+ +ETS+AT+ +++
Sbjct: 135 PTTLITTNTSSLRLADIGLNLKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDATFNQLVD 194
Query: 724 WGKSVGR 744
+GK+VG+
Sbjct: 195 YGKTVGK 201
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 169 bits (411), Expect = 2e-42
Identities = 82/191 (42%), Positives = 128/191 (67%)
Frame = +1
Query: 172 IFQXSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLS 351
+F AMQ+ I+NV ++G G MGSGIAQV+A +G NV L DV+ AL +A K+I +++
Sbjct: 1 MFTAKCAMQN-IRNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMKAISQSVT 59
Query: 352 RVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLD 531
++KK K +E FV ++ RI T + + A ADL++EA +ENI +K +F Q++
Sbjct: 60 HLSKKQ-KGTDKEKSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKRGIFAQIE 118
Query: 532 GVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYK 711
+I +NTSS + ++A ++ K +FGGLHFFNPVPVM+LLEV++ +TS+ TY
Sbjct: 119 QSCKKDSILTTNTSSFLLEDVAKGLQDKTRFGGLHFFNPVPVMKLLEVIRSDDTSDETYA 178
Query: 712 TMMEWGKSVGR 744
T++++G +VG+
Sbjct: 179 TLIKFGTAVGK 189
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 131 bits (316), Expect = 8e-31
Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 3/181 (1%)
Frame = +1
Query: 214 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEG 393
V + G G+MGSGIAQV QAG V L S L +A+++I NL RVA K D P E
Sbjct: 13 VAIFGAGMMGSGIAQVCLQAGYPVNLYGRSEKKLLEARETIKKNLIRVASKKKTDVPMEP 72
Query: 394 ---EKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 564
E+ L + TD A++ A + +EA+ EN+ +K +F+ + P + + +
Sbjct: 73 AALEEIAQIQLDLLQIHTDIPSAAEDAAMAIEAVAENLDLKLDIFQTIQKTCPQNCMLIT 132
Query: 565 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGR 744
NTSSL ++++ V++ F GLHFFNPVPVM+L+EVV ETS T + + K + +
Sbjct: 133 NTSSLKLSQMLPVIQNPALFAGLHFFNPVPVMKLVEVVSTDETSPETTNFLFNFCKEIKK 192
Query: 745 L 747
L
Sbjct: 193 L 193
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 126 bits (304), Expect = 2e-29
Identities = 67/181 (37%), Positives = 108/181 (59%)
Frame = +1
Query: 205 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 384
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 385 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 564
E E+ N + I+ + A K+AD+V+EA+ E++ +KHK+ KQ++ V +TI AS
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 491
Query: 565 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGR 744
NTS+L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G G+
Sbjct: 492 NTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 551
Query: 745 L 747
L
Sbjct: 552 L 552
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 126 bits (304), Expect = 2e-29
Identities = 67/181 (37%), Positives = 108/181 (59%)
Frame = +1
Query: 205 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 384
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 352 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 410
Query: 385 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 564
E E+ N + I+ + A K+AD+V+EA+ E++ +KHK+ KQ++ V +TI AS
Sbjct: 411 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 465
Query: 565 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGR 744
NTS+L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G G+
Sbjct: 466 NTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 525
Query: 745 L 747
L
Sbjct: 526 L 526
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 126 bits (304), Expect = 2e-29
Identities = 67/181 (37%), Positives = 108/181 (59%)
Frame = +1
Query: 205 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 384
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 385 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 564
E E+ N + I+ + A K+AD+V+EA+ E++ +KHK+ KQ++ V +TI AS
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 491
Query: 565 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGR 744
NTS+L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G G+
Sbjct: 492 NTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 551
Query: 745 L 747
L
Sbjct: 552 L 552
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 124 bits (299), Expect = 9e-29
Identities = 65/181 (35%), Positives = 107/181 (59%)
Frame = +1
Query: 205 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 384
+ + V+G G MG+GIA V+ G L+D + + + + + T+L+R K+ K +
Sbjct: 352 VNEIAVVGAGFMGAGIANVTINKGIRTVLLDANQAGVERGQNHVATHLNRQLKRQ-KISK 410
Query: 385 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 564
E EK N + I+ + A K+AD+V+EA+ E++ +KHK+ +Q++ V +TI AS
Sbjct: 411 LEREKIYNHLVPTIDYS-----AMKNADVVIEAVFEDLPLKHKVIRQIENVVGPNTIIAS 465
Query: 565 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGR 744
NTS+L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G G+
Sbjct: 466 NTSALPIKDIAAASSRSDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 525
Query: 745 L 747
L
Sbjct: 526 L 526
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 113 bits (272), Expect = 2e-25
Identities = 67/181 (37%), Positives = 103/181 (56%)
Frame = +1
Query: 205 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 384
IK+V VIGGG MG GIA +G LV+V+N A K + R K + N
Sbjct: 39 IKSVAVIGGGTMGRGIAIAFCLSGFETYLVEVNNKAAEFCKNELEITYKR-EKAFRRLND 97
Query: 385 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 564
+ EK + + TD + + + DL+VEA+ E++ +K +LF +LD + IF +
Sbjct: 98 SKVEKLRKN----LQITTDFQKLN-NCDLIVEAVFEDMKLKKELFTKLDKICKPSCIFGT 152
Query: 565 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGR 744
NTSSL +NE++SV++ K G+HFFNP ++R++EV+ GS+TS T E +S+ +
Sbjct: 153 NTSSLDLNEMSSVLRDPTKVVGIHFFNPANLIRMVEVIYGSKTSSKAVATAFEACRSIKK 212
Query: 745 L 747
L
Sbjct: 213 L 213
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 100 bits (239), Expect = 2e-21
Identities = 62/181 (34%), Positives = 102/181 (56%)
Frame = +1
Query: 205 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 384
+ +V +IGGG MG +A AG LV V N+ K + + + K++ N
Sbjct: 39 VNSVAIIGGGTMGKAMAICFGLAGIETFLV-VRNEQRCKQELEVMYAREKSFKRL---ND 94
Query: 385 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFAS 564
+ EK +N +L +D + S + DL+VE+++E++ +K +LF L+ + S IF +
Sbjct: 95 KRIEK-INANL---KITSDFHKLS-NCDLIVESVIEDMKLKKELFANLENICKSTCIFGT 149
Query: 565 NTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGR 744
NTSSL +NEI+SV++ G+HFFNP V+RL+E++ GS TS T + +S+ +
Sbjct: 150 NTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKK 209
Query: 745 L 747
L
Sbjct: 210 L 210
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 174 FSXFLCNAKCYQECNGYWRWSNGLRHSPGICPSR-TECY 287
F + K +Q C+G W ++GL SP +C SR C+
Sbjct: 1135 FQCSMQTIKEWQVCDGRWDCADGLDESPEMCASRKARCF 1173
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 367 MYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVEN 495
+Y D+PQ+ ++ LGRI+ AA K+ D+ I+++
Sbjct: 204 IYIDDPQDSKRISGKELGRIHKNKSAAHLDKNGDIPYWKIIKS 246
>AF025472-2|AAB71074.2| 625|Caenorhabditis elegans Hypothetical
protein ZK250.5a protein.
Length = 625
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -3
Query: 558 ENSVTWSYAIKLLKQFMLHSN-----IFNNSLNNQISRFGSLCCISCSINPSQ*VIHKFL 394
+N T A +L +QF +HS I+ SL+ QI LC + NP + + +
Sbjct: 101 DNQETLELANRLYEQFKIHSQTTKNPIYVRSLHLQIENLSQLCSVLTYFNPDK-LTELTI 159
Query: 393 SFLG 382
++LG
Sbjct: 160 AYLG 163
>AF025472-1|AAY43980.1| 832|Caenorhabditis elegans Hypothetical
protein ZK250.5b protein.
Length = 832
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -3
Query: 558 ENSVTWSYAIKLLKQFMLHSN-----IFNNSLNNQISRFGSLCCISCSINPSQ*VIHKFL 394
+N T A +L +QF +HS I+ SL+ QI LC + NP + + +
Sbjct: 308 DNQETLELANRLYEQFKIHSQTTKNPIYVRSLHLQIENLSQLCSVLTYFNPDK-LTELTI 366
Query: 393 SFLG 382
++LG
Sbjct: 367 AYLG 370
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 208 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVD--VSNDALAKAKKSIGTNLSRV 357
KNV ++G G G I AQ +VTL+ + L ++ + + TN+ V
Sbjct: 171 KNVVIVGAGPSGIDITLQIAQTANHVTLISKKATYPVLPESVQQMATNVKSV 222
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 289 LVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSA 465
L+D N+ IG +R K M NP G+ ++ G A EA+K A
Sbjct: 17 LIDSPNEQHDPLTNFIGNEFARSEKLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEA 75
>U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical
protein T12C9.7 protein.
Length = 419
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = -3
Query: 522 LKQFMLHSNIFNNSLNNQISRFGSLCCISCSINPSQ*VIHKFLSFLGIIFVHLLCDPAEV 343
L++F+L S F ++ + F + + S +P++ + +L L I++VH P++V
Sbjct: 243 LERFVLTSLSFKITIPTPL-HFSTYMLVYLSASPAKIHLTYYLLELSILYVHNRRFPSDV 301
Query: 342 CANALLGFSQSIIADV 295
ANA + +I ++V
Sbjct: 302 VANAATCLAFAIDSEV 317
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 683 PLTTSSKRITGTGLKK*RPPNLSFLFTTDA-ISFIDREDVFDAKIV 549
P T +++TG LKK RP + SF + DA I +D + KIV
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDANIDDVDPHALQVPKIV 532
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 683 PLTTSSKRITGTGLKK*RPPNLSFLFTTDA-ISFIDREDVFDAKIV 549
P T +++TG LKK RP + SF + DA I +D + KIV
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDANIDDVDPHALQVPKIV 532
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 439 DAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVK 609
D ++KSADLVV I L L+ V HT A + + +E A +VK
Sbjct: 145 DGERSAKSADLVVRQIAAYNKNIEGLINHLNSVDRMHTEAAIEKPTYNRDETAKIVK 201
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 439 DAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVK 609
D ++KSADLVV I L L+ V HT A + + +E A +VK
Sbjct: 145 DGERSAKSADLVVRQIAAYNKNIEGLINHLNSVDRMHTEAAIEKPTYNRDETAKIVK 201
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 8.3
Identities = 29/106 (27%), Positives = 47/106 (44%)
Frame = +1
Query: 241 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLG 420
G+ Q++A Q +L+ +S +A AK + S ++ V K + V+ S G
Sbjct: 681 GAQHGQITAYPRQLESLIRLS-EAHAKIRLSQEVSVDDVEKAFTLWREALKQSAVDPSTG 739
Query: 421 RINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIF 558
R++ A A+ S S VEA+ E + K K G S +F
Sbjct: 740 RVDVAILASGMSASGRKAVEAMCEAV---LKQLKTAKGFVTSKALF 782
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,661,374
Number of Sequences: 27780
Number of extensions: 386331
Number of successful extensions: 968
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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