Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C04
(868 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0597 - 4312592-4313893 32 0.52
01_02_0031 + 10364487-10365407 25 2.1
05_01_0373 + 2922604-2922921 30 2.1
01_06_0993 + 33647301-33647618 30 2.1
10_01_0104 + 1271635-1271878,1272542-1273134 30 2.8
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 30 2.8
08_02_1193 + 25125419-25126810 29 3.6
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 29 3.6
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575... 29 3.6
07_03_0096 + 13351665-13351833,13352383-13352446,13352524-133525... 29 4.8
03_02_0442 + 8529235-8529620,8529721-8529888,8529993-8530158,853... 29 4.8
09_04_0281 - 16360082-16361059,16361608-16361688,16363287-163636... 29 6.4
06_03_1310 + 29238644-29240260 29 6.4
02_05_0506 + 29613307-29613601,29613641-29613678,29613679-296138... 29 6.4
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 28 8.4
08_01_0100 - 714244-715461 28 8.4
03_06_0700 + 35616619-35617069,35619123-35619502 28 8.4
01_06_0576 - 30365903-30366328,30367262-30367640,30368215-303684... 28 8.4
01_05_0669 - 24152057-24152110,24152224-24152308,24152401-241524... 28 8.4
>06_01_0597 - 4312592-4313893
Length = 433
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +1
Query: 523 MLSVPPPGRLSYDHLEQIMEPSWSDQMGSASARE------TRMQLAQRRASFCGTSSNHG 684
+L+ P + YDH E EP+ + +AS T+ Q+ RA+ G S+
Sbjct: 196 LLAARPARAVLYDHPEYKPEPAPPARAATASTYASAIITLTKQQVGALRAACAGASTFRA 255
Query: 685 SGAVVWSGTLPARAPDPNA 741
A+VW ARA P A
Sbjct: 256 VVALVWQCACRARALPPEA 274
>01_02_0031 + 10364487-10365407
Length = 306
Score = 25.4 bits (53), Expect(2) = 2.1
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +1
Query: 529 SVPPP---GRLSYDHLEQIMEPSWSDQMGSAS--ARETRMQLAQRRASFCGTSSNHGSGA 693
S+PPP G + H + +DQ AR A ++F +SS++ GA
Sbjct: 206 SMPPPAFHGMNHHHHQNHFINHGGNDQNAWLMNVARNGGDLGALVYSAFASSSSSNTGGA 265
Query: 694 VVWSGTLPARAPDPNAVYSPKVFLGGLPWD 783
+ A PD + +P + G PWD
Sbjct: 266 GTSAAGAAAPGPDMMDLANPDMPGFGCPWD 295
Score = 23.4 bits (48), Expect(2) = 2.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 484 PWALTLPSPSPRSMLSVPPP 543
P AL P P P ML + PP
Sbjct: 175 PPALPAPPPPPAPMLPLAPP 194
>05_01_0373 + 2922604-2922921
Length = 105
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 868 GAAELAAWXLHTXPGGNALVCESGRAR*CPRAARQGTPSAS 746
GAA L AW T GG A E GR R P R+ P+++
Sbjct: 28 GAAALGAWLGGTEAGGGAWGREGGRLRRRPSGRRRLRPASA 68
>01_06_0993 + 33647301-33647618
Length = 105
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 868 GAAELAAWXLHTXPGGNALVCESGRAR*CPRAARQGTPSAS 746
GAA L AW T GG A E GR R P R+ P+++
Sbjct: 28 GAAALGAWLGGTEAGGGAWGREGGRLRRRPSGRRRLRPASA 68
>10_01_0104 + 1271635-1271878,1272542-1273134
Length = 278
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = -2
Query: 267 RGVATDSTRELESKPRKSANERLFSLELPPRLMS*CNSGMLPPKSFPEVYDVK 109
+G+++ S+R ES R S + + E+PPRL++ + ++ + Y +K
Sbjct: 11 KGLSSPSSRHDESSARSSVDVSMEEAEVPPRLLNDADLDLVGDRELQAYYMLK 63
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -1
Query: 730 PGHEPAEFHSILPR-QIHGLNWFHKM 656
PGH+P + +++PR Q GL WF M
Sbjct: 487 PGHDPVQKVTLIPRGQARGLTWFIPM 512
>08_02_1193 + 25125419-25126810
Length = 463
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2
Query: 339 WATSGLRGSSHRHVFSPRYSLCRGRGVATDSTREL 235
W T LRG + HVFSPR SL RGV R++
Sbjct: 126 WKT--LRGVAATHVFSPR-SLAAARGVRERKVRDI 157
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 640 AQRRASFCGTSSNHGSGAVVWSGTLPARAPDPNAVYSPKVFLGGLPWDITEHALIHTLRH 819
A A TS + G+ A T+P R+ + + KVF+GGL W+ L RH
Sbjct: 3 AAAAAPSSSTSGSPGAAAAAARPTMPYRSRFGDTTLT-KVFVGGLAWETPSEGL---RRH 58
Query: 820 F 822
F
Sbjct: 59 F 59
>03_02_0124 -
5749183-5749773,5750628-5751160,5751191-5753035,
5753632-5753820,5753911-5754013,5754087-5754269,
5754392-5754484,5755031-5755219,5756133-5756327
Length = 1306
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 326 PEVAQSPRSLVPPACFPPRHPRAFTSYSESAQPGAEWNH 442
P + +P L+ PA FPP+H F ++ GA W++
Sbjct: 637 PHFSVAPSPLLAPAAFPPKH---FAGIPPTSLIGAPWSN 672
>07_03_0096 +
13351665-13351833,13352383-13352446,13352524-13352581,
13353250-13353427,13353858-13353988,13355744-13355846,
13355942-13356018,13356641-13356688,13356791-13356940,
13357943-13358134
Length = 389
Score = 29.1 bits (62), Expect = 4.8
Identities = 25/96 (26%), Positives = 39/96 (40%)
Frame = +1
Query: 484 PWALTLPSPSPRSMLSVPPPGRLSYDHLEQIMEPSWSDQMGSASARETRMQLAQRRASFC 663
PW T P P S + P RLSY ++ + D + R+ +++ +S
Sbjct: 76 PWTPTCEFPHPFSRVKQPAGYRLSYQIVDSFVWLGIRDIINDLRKRKLKLRPVTYLSS-A 134
Query: 664 GTSSNHGSGAVVWSGTLPARAPDPNAVYSPKVFLGG 771
SN A +WS P P P + PK+ + G
Sbjct: 135 HAYSNDIPHAYIWS---PYLVPKPKD-WGPKIDVVG 166
>03_02_0442 +
8529235-8529620,8529721-8529888,8529993-8530158,
8530579-8530689,8530845-8530993,8531087-8531217,
8531322-8531421,8532060-8532366
Length = 505
Score = 29.1 bits (62), Expect = 4.8
Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 3/108 (2%)
Frame = +1
Query: 301 MAVGRASQSGGGPEPQVS--RTACLFPATSSTCVHELQRICSAWCGVEP*GVFIARYCRP 474
+ VG A+ GGG EP R +ST RIC C E + P
Sbjct: 14 LGVGEAAVGGGGEEPFYVPLRKRLSVDGKASTA----PRICIWECDGEAGDITCDIVAAP 69
Query: 475 R*RPW-ALTLPSPSPRSMLSVPPPGRLSYDHLEQIMEPSWSDQMGSAS 615
R A +P P+P + PPP R E+ P + + G S
Sbjct: 70 LRRSCSAKAMPPPAPLFRMMTPPPPRPQRGDGEEARRPGEAIRKGHRS 117
>09_04_0281 -
16360082-16361059,16361608-16361688,16363287-16363650,
16363675-16364348
Length = 698
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 810 CVNQGVLGDVPGQPAKEHLRRVYSVRIRGTSRQSST 703
CV QG L + QPA+EHL+ + + RG ++ +
Sbjct: 454 CVVQGHLHRLEQQPAQEHLKMLKQLEQRGHEQEKQS 489
>06_03_1310 + 29238644-29240260
Length = 538
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 317 PRSPEVAQSPRSLVPPACFPPRHPRAFTSYSESAQP 424
P P ++SP+S +PP+ PP A S S+ P
Sbjct: 411 PPPPTYSESPKSSMPPSTSPPSSHGASPPSSSSSPP 446
>02_05_0506 +
29613307-29613601,29613641-29613678,29613679-29613802,
29614358-29614484,29614915-29615002,29615539-29615631,
29616380-29616529
Length = 304
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 664 GTSSNHGSGAVVWSGTLPARAPDPNAVYSPKVFLGGLPWDITEHAL 801
G+ S S + SG +P + Y+ KVF+GGL W+ T L
Sbjct: 9 GSGSGSASASSSSSGLHLLASPFGDTTYT-KVFVGGLAWETTSERL 53
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 155 LLHQDINRGGSSNENRRSFADFLGFDSSSLVESV 256
+ H D++ NE +R F LG +++ +VESV
Sbjct: 63 ICHTDLSAWKGENELQRKFPRILGHEAAGVVESV 96
>08_01_0100 - 714244-715461
Length = 405
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 460 RYCRPR*RPWALTLPSPSPRSMLSVPPPGRLSYD 561
R CRPR P PSP +S+ ++PP + +D
Sbjct: 180 RRCRPR-SPAGYVQPSPLTKSLWAIPPDTTVVWD 212
>03_06_0700 + 35616619-35617069,35619123-35619502
Length = 276
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 490 ALTLPSPSPRSMLSVPPPGRLSYDHLEQIMEPSWSDQMGSASARETR 630
A ++ + SP S+P P L + P+W +GSA AR TR
Sbjct: 6 AASVAAISPLPGASLPRPVSARVPLLPRASPPTWRLSVGSARARSTR 52
>01_06_0576 -
30365903-30366328,30367262-30367640,30368215-30368459,
30368819-30369039,30369786-30370074
Length = 519
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 69 CAWSLRADYWRIRTLHRRLRENFLAAT-CRCYIKTLIAAGAL 191
CAW+L+ +W R L R LR L T R +I + G L
Sbjct: 24 CAWTLQWAWWTPRRLERALRAQGLRGTRYRLFIGDVAENGRL 65
>01_05_0669 -
24152057-24152110,24152224-24152308,24152401-24152486,
24153129-24154341,24154441-24154529,24154607-24154639,
24154674-24154859,24155290-24155380,24155588-24155622,
24155736-24155817,24155968-24156020,24156404-24156469,
24156752-24156820,24156821-24156984,24157925-24158432,
24158543-24158602
Length = 957
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = -3
Query: 500 NVNAQGRXRGLQYLAMKTPHGSTPHQAEQIRCSS*THVDDVAGNKQAVRETWGSGPPP 327
N R R Y TP H A S +H V + ++R G GPPP
Sbjct: 20 NARGSARPRRGYYSGRPTPPPHHHHDAGAELVSGDSHHSAVRASNDSLRRGGGRGPPP 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,932,153
Number of Sequences: 37544
Number of extensions: 745958
Number of successful extensions: 2936
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2929
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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