Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C04
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 44 1e-04
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 1.4
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 31 1.4
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 31 1.4
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 7.5
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical... 28 7.5
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 28 7.5
AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotei... 28 7.5
Z82054-4|CAB04842.1| 453|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z82054-1|CAB04840.1| 453|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81109-18|CAB03255.1| 453|Caenorhabditis elegans Hypothetical p... 28 9.9
U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical pr... 28 9.9
U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeo... 28 9.9
AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protei... 28 9.9
AC017117-12|AAF16614.2| 98|Caenorhabditis elegans Hypothetical... 28 9.9
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = +1
Query: 580 EPSWSDQMGSASARE----TRMQLAQRRASFCGTSSNHGSGA-VVWSGTLPARAPDPNAV 744
E S SD M +RE + +R +F N + W G LP R +
Sbjct: 234 ESSPSDSMNQFPSREHFTSANEESPMKRKNFQQEHGNKNRDSDATWFGELPPR-DYTSPT 292
Query: 745 YSPKVFLGGLPWDITEHALIHTLRHFHPXLCGVAXP 852
+S K+F+GG+PWDITE AL + F C V P
Sbjct: 293 FSRKIFVGGVPWDITEAALKDSFGEF--GSCAVEWP 326
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 317 PRSPEVAQSPRSLVPPAC--FPPRHPRA 394
P +P+V Q+P S +PP FPP P A
Sbjct: 212 PGAPQVPQAPNSFIPPGTGGFPPGQPTA 239
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 742 VYSPKVFLGGLPWDITEHALIHTLRHFHPXLCGVAXPRVRRH 867
+YS KVF+GGLP D++E + T F L + PR H
Sbjct: 242 LYSRKVFIGGLPIDVSEEQVWATFGAFGKVL--IDWPRRPEH 281
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/88 (28%), Positives = 35/88 (39%)
Frame = +2
Query: 326 PEVAQSPRSLVPPACFPPRHPRAFTSYSESAQPGAEWNHEESSSRDIVDLXSVLGR*RCR 505
P V+ S S PPA P AFT+YS S+S + + S+ G C
Sbjct: 1013 PFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPVNSVNSLGGLSFCD 1072
Query: 506 LRHLAPCCLCRRPAASATITSNRLWSHL 589
L+ C R +A+ N + HL
Sbjct: 1073 SGSLS-AVWCARVSAAVCGVDNYRFDHL 1099
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/88 (28%), Positives = 35/88 (39%)
Frame = +2
Query: 326 PEVAQSPRSLVPPACFPPRHPRAFTSYSESAQPGAEWNHEESSSRDIVDLXSVLGR*RCR 505
P V+ S S PPA P AFT+YS S+S + + S+ G C
Sbjct: 1013 PFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPVNSVNSLGGLSFCD 1072
Query: 506 LRHLAPCCLCRRPAASATITSNRLWSHL 589
L+ C R +A+ N + HL
Sbjct: 1073 SGSLS-AVWCARVSAAVCGVDNYRFDHL 1099
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 273 RGRGVATDSTREL-ESKPRKSANERLFSLELPPRLMS*CNSGMLPP 139
R R ++ D +++ E++P+KS E L + LPP+ + + PP
Sbjct: 265 RRRELSDDDRKDVRETQPKKSVKEELPQIPLPPKTEAAASPSPAPP 310
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 273 RGRGVATDSTREL-ESKPRKSANERLFSLELPPRLMS*CNSGMLPP 139
R R ++ D +++ E++P+KS E L + LPP+ + + PP
Sbjct: 265 RRRELSDDDRKDVRETQPKKSVKEELPQIPLPPKTEAAASPSPAPP 310
>Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical
protein F32B6.8b protein.
Length = 495
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 317 PRSPEVAQSPRSLVPPACFPP 379
P+ PE++ PRS VP A PP
Sbjct: 129 PKLPEISDQPRSAVPMASAPP 149
>Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical
protein F32B6.8a protein.
Length = 475
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 317 PRSPEVAQSPRSLVPPACFPP 379
P+ PE++ PRS VP A PP
Sbjct: 109 PKLPEISDQPRSAVPMASAPP 129
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 28.3 bits (60), Expect = 7.5
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Frame = +2
Query: 161 HQDINRGGSSNENRRSFADFLGFDSSSLVESVATPRPRHNEY----------RGENTWRW 310
+ RGG+S+ S A S+S ATP P +++ R E R
Sbjct: 287 YSSATRGGNSS----SAAPLDDIMSTSYSSVAATPPPAYSQLSTSTSTLLRTRRERLERE 342
Query: 311 EEPR-SPEVAQSPRSLVPPACFPPRHPRAFTSYSES 415
EE R S + P+SLVPP PP P + S S
Sbjct: 343 EEGRNSSSMTPQPQSLVPPPPPPPPPPPSAASNGRS 378
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +2
Query: 149 MPLLHQDINRGGSSNENR-RSFADFLGFDSSSLVESVATPRPRHNEYRGENTWRWEEPRS 325
MP + S N++R RSF+ LG D + P+ + + EE +S
Sbjct: 21 MPTTSTEAQSSSSKNQDRCRSFSQELGVDDEPEEQQAPVATPKQTKKAQKTAKTTEEVKS 80
Query: 326 PEVAQSPRSLVPP 364
P + L P
Sbjct: 81 PRKSARKSELKKP 93
>AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical
protein Y111B2A.15 protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 640 AQRRASFCGTSSNHGSGAVVWSGTLPARAPDPNAVYSPKVFLGGLPWDITEHALIHTLRH 819
+ R F G +++ G ++ + R+ D SP +F+GG+P T L+ +
Sbjct: 33 SNHREKFNGAAADDGDESLPFHQLTSVRSDDGYNRTSPFIFIGGVPRSGT--TLMRAMLD 90
Query: 820 FHPXL-CG 840
HP + CG
Sbjct: 91 AHPEVRCG 98
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 499 LPSPSPRSMLSVPPPGRLSYDHLEQIMEPSWSDQMGSASARETRMQLAQR 648
+P PSP+ PPP + H +Q+ P Q + MQ+ QR
Sbjct: 80 MPYPSPQMRAGPPPPQQQQQQHFQQMGIPQ-QQQPQQFTPNGQSMQMQQR 128
>AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotein
sulfotransferase-A protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 640 AQRRASFCGTSSNHGSGAVVWSGTLPARAPDPNAVYSPKVFLGGLPWDITEHALIHTLRH 819
+ R F G +++ G ++ + R+ D SP +F+GG+P T L+ +
Sbjct: 33 SNHREKFNGAAADDGDESLPFHQLTSVRSDDGYNRTSPFIFIGGVPRSGT--TLMRAMLD 90
Query: 820 FHPXL-CG 840
HP + CG
Sbjct: 91 AHPEVRCG 98
>Z82054-4|CAB04842.1| 453|Caenorhabditis elegans Hypothetical
protein R10D12.15 protein.
Length = 453
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 826 GGNALVCESGRAR*CPRAAR--QGTPSASIQR*DPGHEPA 713
G NA V G A CP+AA+ +G P + DP ++PA
Sbjct: 24 GANASVGLFGNASSCPKAAKFGKGPPKSCTIPSDPNNKPA 63
>Z82054-1|CAB04840.1| 453|Caenorhabditis elegans Hypothetical
protein T26F2.1 protein.
Length = 453
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 826 GGNALVCESGRAR*CPRAAR--QGTPSASIQR*DPGHEPA 713
G NA V G A CP+AA+ +G P + DP ++PA
Sbjct: 24 GANASVGLFGNASSCPKAAKFGKGPPKSCTIPSDPNNKPA 63
>Z81109-18|CAB03255.1| 453|Caenorhabditis elegans Hypothetical
protein R10D12.15 protein.
Length = 453
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 826 GGNALVCESGRAR*CPRAAR--QGTPSASIQR*DPGHEPA 713
G NA V G A CP+AA+ +G P + DP ++PA
Sbjct: 24 GANASVGLFGNASSCPKAAKFGKGPPKSCTIPSDPNNKPA 63
>U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical
protein B0412.3 protein.
Length = 1107
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 712 LPARAPDPNAVYSPKVFLGGLPWDITEHAL 801
+P +PDP A S VF G PW I L
Sbjct: 391 VPYPSPDPLANSSSTVFFGQRPWRINHEGL 420
>U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeobox
protein 21 protein.
Length = 495
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 336 ATSGLRGSSHRHVFSPRYSLCRGRGVATDSTRELESKPRKSANER 202
+T G SS V SP Y+ +GR T EL K + SA +
Sbjct: 219 STCGSSVSSTSTVSSPDYTAKKGRATETPKLEELAPKKQSSATPK 263
>AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protein
protein.
Length = 495
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 336 ATSGLRGSSHRHVFSPRYSLCRGRGVATDSTRELESKPRKSANER 202
+T G SS V SP Y+ +GR T EL K + SA +
Sbjct: 219 STCGSSVSSTSTVSSPDYTAKKGRATETPKLEELAPKKQSSATPK 263
>AC017117-12|AAF16614.2| 98|Caenorhabditis elegans Hypothetical
protein F43C11.12 protein.
Length = 98
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 532 VPPPGRLSYDHLEQIMEPSWSDQMGSASARE 624
+PPPG L + +I P+ ++MG AS E
Sbjct: 21 IPPPGNLIPQNALEISPPTSLEEMGGASLSE 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,070,281
Number of Sequences: 27780
Number of extensions: 528808
Number of successful extensions: 1592
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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