Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C03
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 62 3e-09
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 62 3e-09
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 59 2e-08
BC045753-1|AAH45753.1| 125|Homo sapiens AFG3L1 protein protein. 42 0.002
AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens ... 42 0.002
BC105104-1|AAI05105.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 7.5
BC101568-1|AAI01569.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 7.5
BC092472-1|AAH92472.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 7.5
BC025669-1|AAH25669.1| 505|Homo sapiens UNC93B1 protein protein. 31 7.5
AJ422142-1|CAD19522.1| 497|Homo sapiens UNC-93B protein protein. 31 7.5
AJ271326-1|CAC19791.1| 597|Homo sapiens unc-93 related protein ... 31 7.5
BC033623-1|AAH33623.1| 505|Homo sapiens UNC93B1 protein protein. 30 9.9
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 61.7 bits (143), Expect = 3e-09
Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Frame = +1
Query: 250 LDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXXXXXXXXXXXXXXXDK 426
L ++ + FC +PPKGFEKYF G +G+K ++ +E
Sbjct: 55 LTDIIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTRSSGGGGGG 114
Query: 427 WNMNMFXXXXXXXXXXXXXXXXXXQDKEKWMMFGAIGIVTLLASVAYFELRYR---EISW 597
DK+ M F + V ++ L R EI+W
Sbjct: 115 GGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGVMFYLLLKRSGREITW 172
Query: 598 RDFVNLYLNKGVVEKLEVINKKWV 669
+DFVN YL+KGVV++LEV+NK++V
Sbjct: 173 KDFVNNYLSKGVVDRLEVVNKRFV 196
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 61.7 bits (143), Expect = 3e-09
Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Frame = +1
Query: 250 LDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXXXXXXXXXXXXXXXDK 426
L ++ + FC +PPKGFEKYF G +G+K ++ +E
Sbjct: 70 LTDIIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTRSSGGGGGG 129
Query: 427 WNMNMFXXXXXXXXXXXXXXXXXXQDKEKWMMFGAIGIVTLLASVAYFELRYR---EISW 597
DK+ M F + V ++ L R EI+W
Sbjct: 130 GGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGVMFYLLLKRSGREITW 187
Query: 598 RDFVNLYLNKGVVEKLEVINKKWV 669
+DFVN YL+KGVV++LEV+NK++V
Sbjct: 188 KDFVNNYLSKGVVDRLEVVNKRFV 211
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 58.8 bits (136), Expect = 2e-08
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Frame = +1
Query: 250 LDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXXXXXXXXXXXXXXXDK 426
L ++ + FC +PPKGF KYF G +G+K ++ +E
Sbjct: 55 LTDIIAAYQRFCSRPPKGFGKYFPNGKNGKKASEPKEVMGEKKESKPAATTRSSGGGGGG 114
Query: 427 WNMNMFXXXXXXXXXXXXXXXXXXQDKEKWMMFGAIGIVTLLASVAYFELRYR---EISW 597
DK+ M F + V ++ L R EI+W
Sbjct: 115 GGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGVMFYLLLKRSGREITW 172
Query: 598 RDFVNLYLNKGVVEKLEVINKKWV 669
+DFVN YL+KGVV++LEV+NK++V
Sbjct: 173 KDFVNNYLSKGVVDRLEVVNKRFV 196
>BC045753-1|AAH45753.1| 125|Homo sapiens AFG3L1 protein protein.
Length = 125
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 565 YFELRYREISWRDFVNLYLNKGVVEKLEVINKKWV 669
YF REI+W+ FV YL +G+V++LEV+NK+ V
Sbjct: 54 YFRDPGREITWKHFVQYYLARGLVDRLEVVNKQSV 88
>AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ39725 fis, clone SMINT2015294, highly similar to
Mus musculus ATP-dependent zinc metalloprotease (Afg3l1)
mRNA. ).
Length = 199
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 565 YFELRYREISWRDFVNLYLNKGVVEKLEVINKKWV 669
YF REI+W+ FV YL +G+V++LEV+NK+ V
Sbjct: 54 YFRDPGREITWKHFVQYYLARGLVDRLEVVNKQSV 88
>BC105104-1|AAI05105.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 KWMMFGAIGIVTLLASVAYFELRY 582
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC101568-1|AAI01569.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 KWMMFGAIGIVTLLASVAYFELRY 582
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC092472-1|AAH92472.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 KWMMFGAIGIVTLLASVAYFELRY 582
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC025669-1|AAH25669.1| 505|Homo sapiens UNC93B1 protein protein.
Length = 505
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 KWMMFGAIGIVTLLASVAYFELRY 582
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>AJ422142-1|CAD19522.1| 497|Homo sapiens UNC-93B protein protein.
Length = 497
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 KWMMFGAIGIVTLLASVAYFELRY 582
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>AJ271326-1|CAC19791.1| 597|Homo sapiens unc-93 related protein
protein.
Length = 597
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 KWMMFGAIGIVTLLASVAYFELRY 582
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC033623-1|AAH33623.1| 505|Homo sapiens UNC93B1 protein protein.
Length = 505
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 511 KWMMFGAIGIVTLLASVAYFELRYREI 591
KWMMF A+GI L S Y+E RY +
Sbjct: 136 KWMMFLAVGIYALFVSTNYWE-RYHTL 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,141,589
Number of Sequences: 237096
Number of extensions: 1903267
Number of successful extensions: 3143
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3143
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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