Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_C03
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p pro...   110   3e-24
AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA...   110   3e-24
AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB...   101   1e-21

>AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p
           protein.
          Length = 826

 Score =  110 bits (264), Expect = 3e-24
 Identities = 81/228 (35%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
 Frame = +1

Query: 244 PALDSVLRQWYEFCKKPPKGFEKYF--------QP-GS-GQK-----DAKTQEKNXXXXX 378
           P L  V++Q    CKKPPKGFEKYF        QP GS G K      +K+  +      
Sbjct: 50  PLLRYVVKQIQLLCKKPPKGFEKYFEAGGKSSGQPKGSVGDKKPPAGSSKSASEKPSTST 109

Query: 379 XXXXXXXXXXXXXXDKWNMNMFXXXXXXXXXXXXXXXXXXQ--------DKEKWMMFGAI 534
                           WN  MF                           D+E+W++ GAI
Sbjct: 110 PASVKPSRSQTDAKSDWNFGMFSNSSRGPAGKGGNSLGGRPLGENGGGGDRERWILLGAI 169

Query: 535 GIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVPSKTSRECIRRKGYL 714
           G V L+ S A+FE+ Y+EISW++FVN YL+KGVVEKLEV+NKKWV  +  +      G L
Sbjct: 170 GAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVL 229

Query: 715 GLQ*VVSIXFERNLENAXI*NEH*SPLILVPVICXN*SGGCQSTGXAP 858
                    FERNLE A    +    +  VPVI  N       TG  P
Sbjct: 230 WFNIGSVDSFERNLEAAQT-EQGTESINFVPVIYRNEVEAASLTGLLP 276



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 818 KTEVEAASLPGMXPTLLIIGFXIYM 892
           + EVEAASL G+ PTLLIIGF +YM
Sbjct: 263 RNEVEAASLTGLLPTLLIIGFLVYM 287


>AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA,
           isoform A protein.
          Length = 826

 Score =  110 bits (264), Expect = 3e-24
 Identities = 81/228 (35%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
 Frame = +1

Query: 244 PALDSVLRQWYEFCKKPPKGFEKYF--------QP-GS-GQK-----DAKTQEKNXXXXX 378
           P L  V++Q    CKKPPKGFEKYF        QP GS G K      +K+  +      
Sbjct: 50  PLLRYVVKQIQLLCKKPPKGFEKYFEAGGKSSGQPKGSVGDKKPPAGSSKSASEKPSTST 109

Query: 379 XXXXXXXXXXXXXXDKWNMNMFXXXXXXXXXXXXXXXXXXQ--------DKEKWMMFGAI 534
                           WN  MF                           D+E+W++ GAI
Sbjct: 110 PASVKPSRSQTDAKSDWNFGMFSNSSRGPAGKGGNSLGGRPLGENGGGGDRERWILLGAI 169

Query: 535 GIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVPSKTSRECIRRKGYL 714
           G V L+ S A+FE+ Y+EISW++FVN YL+KGVVEKLEV+NKKWV  +  +      G L
Sbjct: 170 GAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNSGSGVL 229

Query: 715 GLQ*VVSIXFERNLENAXI*NEH*SPLILVPVICXN*SGGCQSTGXAP 858
                    FERNLE A    +    +  VPVI  N       TG  P
Sbjct: 230 WFNIGSVDSFERNLEAAQT-EQGTESINFVPVIYRNEVEAASLTGLLP 276



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 818 KTEVEAASLPGMXPTLLIIGFXIYM 892
           + EVEAASL G+ PTLLIIGF +YM
Sbjct: 263 RNEVEAASLTGLLPTLLIIGFLVYM 287


>AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB,
           isoform B protein.
          Length = 697

 Score =  101 bits (242), Expect = 1e-21
 Identities = 54/119 (45%), Positives = 70/119 (58%)
 Frame = +1

Query: 502 DKEKWMMFGAIGIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVPSKT 681
           D+E+W++ GAIG V L+ S A+FE+ Y+EISW++FVN YL+KGVVEKLEV+NKKWV  + 
Sbjct: 30  DRERWILLGAIGAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRL 89

Query: 682 SRECIRRKGYLGLQ*VVSIXFERNLENAXI*NEH*SPLILVPVICXN*SGGCQSTGXAP 858
            +      G L         FERNLE A    +    +  VPVI  N       TG  P
Sbjct: 90  QQNSNSGSGVLWFNIGSVDSFERNLEAAQT-EQGTESINFVPVIYRNEVEAASLTGLLP 147



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 818 KTEVEAASLPGMXPTLLIIGFXIYM 892
           + EVEAASL G+ PTLLIIGF +YM
Sbjct: 134 RNEVEAASLTGLLPTLLIIGFLVYM 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,580,086
Number of Sequences: 53049
Number of extensions: 598653
Number of successful extensions: 1091
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)