Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_C02
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   2.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   7.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   7.3  
AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.           24   7.3  
AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.           24   7.3  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 725  IKCESSISTLTAWRWRPPWIF-LITSWVFFAKSS*AAL 615
            I C+   STL A +  PP +F  + SW+  A  + AA+
Sbjct: 3173 ISCDGEQSTLLAVQIEPPRLFEYVDSWLLLAHVAPAAV 3210


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +1

Query: 562  KKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQGGRQRQAVSVD 705
            KK+ + + + +E+   K+K A+ +  +N   +   +  G Q + V  D
Sbjct: 1011 KKIQAIITDLDEEKKKKLKVAWSEVDENFGSIFSTLLPGTQARLVPPD 1058


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 613 IKAAYDDFAKNTQEVIKKI--QGGRQRQAVSVDIELSHLIXYFFH 741
           I+A +D      ++ +  I  Q GR +     DIE S LI +F H
Sbjct: 814 IRAGHDFLLAIQEQCVTVIERQQGRWKALKPFDIEKSSLIHFFTH 858


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 613 IKAAYDDFAKNTQEVIKKI--QGGRQRQAVSVDIELSHLIXYFFH 741
           I+A +D      ++ +  I  Q GR +     DIE S LI +F H
Sbjct: 815 IRAGHDFLLAIQEQCVTVIERQQGRWKALKPFDIEKSSLIHFFTH 859


>AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 603 GAQDQGRLRRLREEHPGGDQEDPGRP--PTPSSERR 704
           G Q Q   ++ ++  P G Q  PG P  P P+  +R
Sbjct: 19  GPQQQQHQQQQQQHGPSGPQYQPGVPLAPYPTETQR 54


>AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 603 GAQDQGRLRRLREEHPGGDQEDPGRP--PTPSSERR 704
           G Q Q   ++ ++  P G Q  PG P  P P+  +R
Sbjct: 19  GPQQQQHQQQQQQHGPSGPQYQPGVPLAPYPTETQR 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,858
Number of Sequences: 2352
Number of extensions: 9998
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)