Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_C01
(932 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 99 8e-20
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 9e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.006
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.090
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.9
UniRef50_A4A5B7 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.9
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.9
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.9
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 99 bits (238), Expect = 8e-20
Identities = 57/84 (67%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Frame = +1
Query: 490 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXS---SLVRSP 660
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL + +L+ P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 661 CSRPLPLTGIPXPPFSLREAWRXL 732
C LP T PPFSLREAWR L
Sbjct: 62 CR--LPDT---CPPFSLREAWRFL 80
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 76.6 bits (180), Expect = 9e-13
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +1
Query: 508 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 636
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +1
Query: 514 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 636
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 321 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 419
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -1
Query: 563 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 384
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 297 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 455
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 99 DPDMIRYIDEFGQTTTRMQ 155
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.006
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 223 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 345
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.090
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 367 ERGSGRAPNTQTASPRALADSLMQ 296
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.1 bits (87), Expect = 0.16
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 457 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 636
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 637 XS 642
S
Sbjct: 104 QS 105
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.9
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 590 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 420
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 419 SELIPL 402
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_A4A5B7 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 1314
Score = 34.3 bits (75), Expect = 4.5
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Frame = +1
Query: 424 GGNTVIHRIRGITQERTCEQKASKRPGT-VKRPRCWRFSIGSA------PLTSITKIDAQ 582
GGN V+ + GI + +++++ PG + F G+ PL T D
Sbjct: 735 GGNLVLSTLDGIASADSSTEQSAENPGPGIDLALTGEFDTGAVAPWLKQPLLGFTSGDTA 794
Query: 583 VRGGETRQDYKDTRRFPLXSSLVRSPCSRPLPLTGIPXPPFSL 711
GE R KD RF L S L+ + P P + P L
Sbjct: 795 FT-GELRLSDKDNPRFILRSELLGAAFDAPQPFEKVADQPLPL 836
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.9
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -3
Query: 630 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 451
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 450 DSVD 439
D +D
Sbjct: 304 DHID 307
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.9
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 424 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 603
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 604 QDYKDT 621
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.9
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 430 NTVIHRIRGITQERTCE 480
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.9
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -1
Query: 257 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQIN 90
+MNA V + FIAA + +T + AFF L S G ++VSY VW ++
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDLH 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,454,557
Number of Sequences: 1657284
Number of extensions: 14133432
Number of successful extensions: 36721
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 35096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36699
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 85324527343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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