Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B22
         (941 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0548 + 4099386-4099847,4100435-4101316                           33   0.33 
03_01_0547 + 4093196-4093657,4094267-4095148                           33   0.33 
03_01_0544 + 4082528-4082989,4083585-4084466                           33   0.33 
03_01_0543 + 4076981-4077442,4078145-4079026                           33   0.33 
02_01_0232 + 1543597-1543800,1544189-1544377,1544695-1544859,154...    29   7.1  
02_05_1044 + 33728623-33728768,33728814-33728993,33729446-337295...    28   9.4  

>03_01_0548 + 4099386-4099847,4100435-4101316
          Length = 447

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 311 INMRITNPRNTKRFCTTRTGPGPRDCICSVSQGYRQAKCSFLEIGTQKFGDDILXSRWSK 490
           I++ +     TK +CT    PG RD I ++  G  QA C+ L I +   G +   S+  +
Sbjct: 73  IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132

Query: 491 TXDPRLXXXNL 523
           T +  L    L
Sbjct: 133 TREHALLAFTL 143


>03_01_0547 + 4093196-4093657,4094267-4095148
          Length = 447

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 311 INMRITNPRNTKRFCTTRTGPGPRDCICSVSQGYRQAKCSFLEIGTQKFGDDILXSRWSK 490
           I++ +     TK +CT    PG RD I ++  G  QA C+ L I +   G +   S+  +
Sbjct: 73  IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132

Query: 491 TXDPRLXXXNL 523
           T +  L    L
Sbjct: 133 TREHALLAFTL 143


>03_01_0544 + 4082528-4082989,4083585-4084466
          Length = 447

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 311 INMRITNPRNTKRFCTTRTGPGPRDCICSVSQGYRQAKCSFLEIGTQKFGDDILXSRWSK 490
           I++ +     TK +CT    PG RD I ++  G  QA C+ L I +   G +   S+  +
Sbjct: 73  IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132

Query: 491 TXDPRLXXXNL 523
           T +  L    L
Sbjct: 133 TREHALLAFTL 143


>03_01_0543 + 4076981-4077442,4078145-4079026
          Length = 447

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 311 INMRITNPRNTKRFCTTRTGPGPRDCICSVSQGYRQAKCSFLEIGTQKFGDDILXSRWSK 490
           I++ +     TK +CT    PG RD I ++  G  QA C+ L I +   G +   S+  +
Sbjct: 73  IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132

Query: 491 TXDPRLXXXNL 523
           T +  L    L
Sbjct: 133 TREHALLAFTL 143


>02_01_0232 +
           1543597-1543800,1544189-1544377,1544695-1544859,
           1545199-1545459,1546059-1546271,1546365-1546587,
           1547974-1548149
          Length = 476

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 379 QRLHMLCISGIQTSQVQLPRNRY 447
           QRL +LCI G+ T  +++ R+RY
Sbjct: 447 QRLTVLCIRGVSTYPIKIIRSRY 469


>02_05_1044 +
           33728623-33728768,33728814-33728993,33729446-33729523,
           33729834-33729930,33730206-33730339,33730944-33731025,
           33731631-33731717,33731875-33731981,33732674-33732845,
           33733018-33733259,33733482-33733563,33733954-33734019,
           33734040-33734159,33734935-33735012,33735083-33735178,
           33735791-33735897,33736031-33736199,33736402-33736452,
           33736567-33736650,33736946-33737040,33737175-33737265,
           33737342-33737488,33737614-33737676
          Length = 857

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 286 DKDADNLLDQYEDYEPAEYQEVLYNEDRPWSQRLHMLCI 402
           D + D  +  YE YE   +   +Y E  PW   L +L I
Sbjct: 470 DSNLDVTIGPYETYEDGLFSYKIYKEFSPWDPFLPVLVI 508


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,699,302
Number of Sequences: 37544
Number of extensions: 252563
Number of successful extensions: 577
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)