Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B22
         (941 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.5  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   4.4  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
 Frame = +2

Query: 113 RSVKVQRLSTINYQ-RKAIV*SCSVKFATTWGQGPG--SYYCSWQHARWYSANLSIKPSR 283
           R V V  ++ ++++ R   +   +    +TW  G G   ++ S QH    S+ ++ +   
Sbjct: 246 RGVSVDSMNWLSFKVRVPAILRDAALTPSTWPVGIGVREFFQSRQHDHQTSSPIATRNRF 305

Query: 284 KTKTPTTYWINMRIT-NPRNTKRFCT-TRTGPGP 379
            T+TP T   +   T  P  T R    T T P P
Sbjct: 306 TTRTPATSTEHRYTTRTPTTTHRLAARTSTPPDP 339


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 14/61 (22%), Positives = 26/61 (42%)
 Frame = -2

Query: 463  IAELLCTDFEEAALGLSVSLRYRAYAVSGTRACPRCTKPLGIPRVRNPHIDPISCRRLCL 284
            I +L+ T+  E   G+ +  +  +   + +        P    + R PHI P    R+CL
Sbjct: 948  IQKLMQTEPHENITGMEMEFKKLSNVKADSTRFVTANLPCNKHKTRVPHILPYESSRVCL 1007

Query: 283  S 281
            +
Sbjct: 1008 T 1008


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,467
Number of Sequences: 2352
Number of extensions: 9017
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)