Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_B16
(964 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 35 0.075
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.075
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.23
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.32
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.32
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.32
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.40
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.40
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 31 1.2
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 25 1.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.8
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.6
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.075
Identities = 28/93 (30%), Positives = 29/93 (31%)
Frame = +3
Query: 255 GXGXGPPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWXNGGXLXFXGPPXGGEKPXX 434
G GPPP + G GPPPL GGG G GPP G
Sbjct: 128 GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGD----PRGPPGGMGGPPGHGGMGGP 183
Query: 435 PPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGG 533
P P GG P P G GG
Sbjct: 184 PGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGG 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.075
Identities = 28/93 (30%), Positives = 29/93 (31%)
Frame = +3
Query: 255 GXGXGPPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWXNGGXLXFXGPPXGGEKPXX 434
G GPPP + G GPPPL GGG G GPP G
Sbjct: 408 GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGD----PRGPPGGMGGPPGHGGMGGP 463
Query: 435 PPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGG 533
P P GG P P G GG
Sbjct: 464 PGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGG 496
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 396 FXGPPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXGPXPXPP 566
F PP G PP F P GG + PPPP G G GP P
Sbjct: 378 FAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYG----PPPPGGPGAPGSYGPPQGGP 430
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/109 (30%), Positives = 35/109 (32%), Gaps = 5/109 (4%)
Frame = +2
Query: 272 PPGXGGXRXPPVRXXXXXXGPPPXVRRXXKXXFLXKRGXLGFFXAPFXGGKTXXPPPXXX 451
P GG PPV PPP + F G P G PPP
Sbjct: 361 PQSFGGP-PPPVSSAPGNFAPPP--QSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGP 417
Query: 452 FF---FXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPP--XPPXKXPXP 583
+ P GG F PPPP G GPPP PP P P
Sbjct: 418 GAPGSYGPPQGGPGGFG-----PPPPGGPGA--YGPPPTGFPPVGAPPP 459
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 PPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWX-NGGXLXFXGPPXGGEKPXXPPP 443
PPP G G GPPP G G + GG F PP GG PPP
Sbjct: 392 PPPSAFGAPQGPGGP--GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 26.2 bits (55), Expect(2) = 0.71
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 656 GXPGXXFFXPPXPXXXXTXXGGPGXXXFFXXXXXXXXXIXXKXTPPPXXGGGXPPPRGNX 835
G PG F PP GGPG + PP GG PP
Sbjct: 385 GPPGA-FAPPPSAFGAPQGPGGPGG---YGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Query: 836 XXSXGXPP 859
+ G PP
Sbjct: 441 PGAYGPPP 448
Score = 24.2 bits (50), Expect(2) = 0.71
Identities = 26/106 (24%), Positives = 30/106 (28%)
Frame = +2
Query: 272 PPGXGGXRXPPVRXXXXXXGPPPXVRRXXKXXFLXKRGXLGFFXAPFXGGKTXXPPPXXX 451
PP PP + PPP + + GF GG PP
Sbjct: 247 PPVQEFAPPPPQQQQQQFQAPPPPMASHSSISSTPVQQQ-GFAPPQQFGGPPPSGPPSEY 305
Query: 452 FFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPXKXPXPXG 589
+ P F PPP F PP PP P P G
Sbjct: 306 GGYAPPQQQQQQFGA----PPPQGAPQQGFGAPPQGPPQGGP-PQG 346
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPP 565
P GG PPP G PPPP G GPPP PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 405 PPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXGPXPXPPXKXPXP 584
PP G P PPP GG PPPP G GP P PP P
Sbjct: 720 PPITGGPPPPPPP----------GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 31.5 bits (68), Expect = 0.92
Identities = 31/110 (28%), Positives = 31/110 (28%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 GXGXGPPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWXNGGXLXFXG-PPXGGEKPX 431
G PP GG P PPP GG G PP G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 432 XPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXG-PXPXPPXKXP 578
PPP P F PPPP G P PP K P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 352 PPYXGGGPXAXXTXPYXGXXXPPXPGGGPXP 260
PP GG P P G PP P GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXG------PGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPX 568
P GG PPP G P GG PPPP G PPP PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG-----CPPPPPP- 774
Query: 569 KXPXPXG 589
P P G
Sbjct: 775 --PPPGG 779
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXPXP 254
PPP GG P P PP PGG P P P
Sbjct: 744 PPPPPGGLPPISGGPP----PPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPP 565
P GG PPP G PPPP G GPPP PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 405 PPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXGPXPXPPXKXPXP 584
PP G P PPP GG PPPP G GP P PP P
Sbjct: 720 PPITGGPPPPPPP----------GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 31.5 bits (68), Expect = 0.92
Identities = 31/110 (28%), Positives = 31/110 (28%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 GXGXGPPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWXNGGXLXFXG-PPXGGEKPX 431
G PP GG P PPP GG G PP G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 432 XPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXG-PXPXPPXKXP 578
PPP P F PPPP G P PP K P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 352 PPYXGGGPXAXXTXPYXGXXXPPXPGGGPXP 260
PP GG P P G PP P GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXG------PGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPX 568
P GG PPP G P GG PPPP G PPP PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG-----CPPPPPP- 774
Query: 569 KXPXPXG 589
P P G
Sbjct: 775 --PPPGG 779
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXPXP 254
PPP GG P P PP PGG P P P
Sbjct: 744 PPPPPGGLPPISGGPP----PPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPP 565
P GG PPP G PPPP G GPPP PP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 405 PPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXGPXPXPPXKXPXP 584
PP G P PPP GG PPPP G GP P PP P
Sbjct: 303 PPITGGPPPPPPP----------GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 31.5 bits (68), Expect = 0.92
Identities = 31/110 (28%), Positives = 31/110 (28%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 GXGXGPPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWXNGGXLXFXG-PPXGGEKPX 431
G PP GG P PPP GG G PP G P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 432 XPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXG-PXPXPPXKXP 578
PPP P F PPPP G P PP K P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 352 PPYXGGGPXAXXTXPYXGXXXPPXPGGGPXP 260
PP GG P P G PP P GG P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXG------PGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPX 568
P GG PPP G P GG PPPP G PPP PP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG-----CPPPPPP- 357
Query: 569 KXPXPXG 589
P P G
Sbjct: 358 --PPPGG 362
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXPXP 254
PPP GG P P PP PGG P P P
Sbjct: 327 PPPPPGGLPPISGGPP----PPPPPPGGCPPPPP 356
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +3
Query: 405 PPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXG--GXXFXGPXPXPPXKXP 578
PP G PPP P G PPPP G P P PP +
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 579 XP 584
P
Sbjct: 328 PP 329
Score = 30.3 bits (65), Expect(2) = 0.32
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXPXP 254
PPP G P P G PP G P P P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 21.4 bits (43), Expect(2) = 0.32
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = -1
Query: 547 PXKXXPPXPXGGGGFXXXXKXXXPPP 470
P PP P GG PPP
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +3
Query: 405 PPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXG--GXXFXGPXPXPPXKXP 578
PP G PPP P G PPPP G P P PP +
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 579 XP 584
P
Sbjct: 313 PP 314
Score = 30.3 bits (65), Expect(2) = 0.32
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXPXP 254
PPP G P P G PP G P P P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 21.4 bits (43), Expect(2) = 0.32
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = -1
Query: 547 PXKXXPPXPXGGGGFXXXXKXXXPPP 470
P PP P GG PPP
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPP 306
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +3
Query: 405 PPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXG--GXXFXGPXPXPPXKXP 578
PP G PPP P G PPPP G P P PP +
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 579 XP 584
P
Sbjct: 307 PP 308
Score = 30.3 bits (65), Expect(2) = 0.32
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXPXP 254
PPP G P P G PP G P P P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 21.4 bits (43), Expect(2) = 0.32
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = -1
Query: 547 PXKXXPPXPXGGGGFXXXXKXXXPPP 470
P PP P GG PPP
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPP 300
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPPXKXPXPXGV 592
PPPP G + PPP PP + P P G+
Sbjct: 287 PPPPPSSGM-WPPPPPPPPGRTPGPPGM 313
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPXKXP 577
P G PPP F PG G PPPP G G PP PP + P
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPPGMGGM--------PPPPPPGMRYPGGMPPPPPPRYP 356
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPXKXPXPX 586
P G PPP GP G PPP G G PP PP P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPG----MPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
Query: 587 GV 592
G+
Sbjct: 346 GM 347
Score = 28.7 bits (61), Expect = 6.5
Identities = 28/102 (27%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = +3
Query: 270 PPPGXGGYXXPXYGXVXXAXGPPPL*G---GGXXXFFWXNGGXLXFXGPPXGGEKPXXPP 440
PPP G + P GPP + G F G PP G P P
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 441 PXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXGPXPXPP 566
P P G G PP P G P P PP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI---PPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPPXKXPXPXGV 592
PPPP G + PPP PP + P P G+
Sbjct: 297 PPPPPSSGM-WPPPPPPPPGRTPGPPGM 323
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPXKXP 577
P G PPP F PG G PPPP G G PP PP + P
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPPGMGGM--------PPPPPPGMRYPGGMPPPPPPRYP 366
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +2
Query: 407 PFXGGKTXXPPPXXXFFFXGPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPPXKXPXPX 586
P G PPP GP G PPP G G PP PP P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPG----MPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
Query: 587 GV 592
G+
Sbjct: 356 GM 357
Score = 28.7 bits (61), Expect = 6.5
Identities = 28/102 (27%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = +3
Query: 270 PPPGXGGYXXPXYGXVXXAXGPPPL*G---GGXXXFFWXNGGXLXFXGPPXGGEKPXXPP 440
PPP G + P GPP + G F G PP G P P
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 441 PXXXFFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXGPXPXPP 566
P P G G PP P G P P PP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI---PPPPPP 397
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPPXKXPXPXGV 592
PPPP G F GP PP P GV
Sbjct: 25 PPPPNDSGHEFIGPSSGPPQVTITPSGV 52
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 25.0 bits (52), Expect(2) = 1.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 764 AGGGGAXGKXPXXXAPXXGFXXXXGPGG 681
AGGGG K AP G G GG
Sbjct: 28 AGGGGGASKVGGGAAPPPGTSVYMGAGG 55
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 575 GFXXGXRXGAXKXXTPPPXGGGG 507
G G A PPP GGGG
Sbjct: 71 GAPVGGAPAAVSIGAPPPAGGGG 93
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 464 GPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPP 565
G GGG PPPP G PPP PP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 464 GPGGGXXXFXXXXKXPPPPXXGGXXFXGPPPXPP 565
G GGG PPPP G PPP PP
Sbjct: 26 GGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPP 565
PPPP GG PPP PP
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPP 565
PPPP G + PPP PP
Sbjct: 41 PPPPPPCGGGYEAPPPPPP 59
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 396 FXGPPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGG 533
F P P PPP P G G PPPP G GG
Sbjct: 620 FGMAPISSAAPPPPPPPPPMGLPAVGAGAPP---PPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 396 FXGPPXGGEKPXXPPPXXXFFXPXXGGGXXXFXXXKXPPPPXGXGG 533
F P P PPP P G G PPPP G GG
Sbjct: 446 FGMAPISSAAPPPPPPPPPMGLPAVGAGAPP---PPPPPPPSGAGG 488
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 352 PPYXGGGPXAXXTXPYXGXXXPPXPGGGP 266
PP GGP A P G PP P G P
Sbjct: 182 PPGAPGGPGAPGNTPSGGAAGPPGPPGPP 210
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPP 565
PPPP G GPPP PP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPPXK--XPXPXG 589
P PP G GPPP PP + P P G
Sbjct: 134 PGPPGRDGALLPGPPPKPPCQKCPPGPPG 162
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXP 260
PPP GG P P PP P GGP P
Sbjct: 1585 PPPLMGGPPPRLGMPP----PGPPPPNGGPPP 1612
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 355 PPPYXGGGPXAXXTXPYXGXXXPPXPGGGPXPXP 254
PPP GGGP P G PP GGP P P
Sbjct: 1482 PPPMRGGGPPMRGGPPMRG--GPPMFRGGP-PGP 1512
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 509 PPPPXXGGXXFXGPPPXPPXKXPXPXGV 592
PPPP PPP PP P GV
Sbjct: 1345 PPPPSDDLTPVPPPPPPPPTMSKAPTGV 1372
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +3
Query: 267 GPPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWXNGGXLXFXGPPXG-GEKPXXPPP 443
GPP GG P G GPPP GG G GPP G P PPP
Sbjct: 1553 GPP--MGGLPPPHGGMNGWRGGPPPPRGGSH-----CQGPPPLMGGPPPRLGMPPPGPPP 1605
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/97 (24%), Positives = 28/97 (28%)
Frame = -3
Query: 761 GGGGAXGKXPXXXAPXXGFXXXXGPGGXKXFXRGXPXXVGXTGXXXXXXXXXXXXPXXPG 582
GGGG+ G AP G GG G G +G G
Sbjct: 213 GGGGSSGGGGYASAPSGGGGYATSGGGGS----GGYATGGSSGGGYSSGGSSGGGYSTGG 268
Query: 581 GXGFXXGXRXGAXKXXTPPPXGGGGXFXRGKXXXPPP 471
G G+ G G GGG + PPP
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP 305
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/97 (24%), Positives = 28/97 (28%)
Frame = -3
Query: 761 GGGGAXGKXPXXXAPXXGFXXXXGPGGXKXFXRGXPXXVGXTGXXXXXXXXXXXXPXXPG 582
GGGG+ G AP G GG G G +G G
Sbjct: 213 GGGGSSGGGGYASAPSGGGGYATSGGGGS----GGYATGGSSGGGYSSGGSSGGGYSTGG 268
Query: 581 GXGFXXGXRXGAXKXXTPPPXGGGGXFXRGKXXXPPP 471
G G+ G G GGG + PPP
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP 305
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 453 FFXPXXGGGXXXFXXXKXPPPPXGXGGXXFXGPXPXPPXKXP 578
F P GGG PP P G GG PP P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLP 58
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = +3
Query: 270 PPPGXGGYXXPXYGXVXXAXGPPPL*GGGXXXFFWXNGGXLXFXGPPXGGEKPXXPPP 443
PPP G+ P G PPP+ GG GG PP G P PPP
Sbjct: 66 PPPVPNGFIPPPPGP-GGIPPPPPMFAGGIPPPPPMMGGIP--PPPPMFGAPPPPPPP 120
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 10/54 (18%)
Frame = +2
Query: 434 PPPXXXFFFX---GPGG--GXXXFXXXXKXPPPPXXGG-----XXFXGPPPXPP 565
PPP F GPGG PPPP GG F PPP PP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 583 GXGXFXGGXGXGPXKXXPPXPXGGGG 506
G G GG G G + PP P GGG
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,278,967
Number of Sequences: 27780
Number of extensions: 388697
Number of successful extensions: 1688
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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