BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_B15
(909 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071704-1|AAH71704.1| 87|Homo sapiens BLCAP protein protein. 66 2e-10
BC047692-1|AAH47692.1| 87|Homo sapiens bladder cancer associat... 66 2e-10
AL109614-3|CAM19262.1| 78|Homo sapiens bladder cancer associat... 66 2e-10
AL109614-2|CAM19261.1| 87|Homo sapiens bladder cancer associat... 66 2e-10
AL109614-1|CAC00475.1| 87|Homo sapiens bladder cancer associat... 66 2e-10
AF053470-1|AAC06370.1| 87|Homo sapiens BC10 protein. 66 2e-10
AL109614-4|CAM19263.1| 62|Homo sapiens bladder cancer associat... 59 3e-08
>BC071704-1|AAH71704.1| 87|Homo sapiens BLCAP protein protein.
Length = 87
Score = 66.1 bits (154), Expect = 2e-10
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 268 THVMFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWN 405
+H MFM YL+ F LERKPCT+C++VFL + LICYS GNC ++
Sbjct: 24 SHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYSCWGNCFLYH 69
>BC047692-1|AAH47692.1| 87|Homo sapiens bladder cancer associated
protein protein.
Length = 87
Score = 66.1 bits (154), Expect = 2e-10
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 268 THVMFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWN 405
+H MFM YL+ F LERKPCT+C++VFL + LICYS GNC ++
Sbjct: 24 SHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYSCWGNCFLYH 69
>AL109614-3|CAM19262.1| 78|Homo sapiens bladder cancer associated
protein protein.
Length = 78
Score = 66.1 bits (154), Expect = 2e-10
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 268 THVMFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWN 405
+H MFM YL+ F LERKPCT+C++VFL + LICYS GNC ++
Sbjct: 24 SHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYSCWGNCFLYH 69
>AL109614-2|CAM19261.1| 87|Homo sapiens bladder cancer associated
protein protein.
Length = 87
Score = 66.1 bits (154), Expect = 2e-10
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 268 THVMFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWN 405
+H MFM YL+ F LERKPCT+C++VFL + LICYS GNC ++
Sbjct: 24 SHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYSCWGNCFLYH 69
>AL109614-1|CAC00475.1| 87|Homo sapiens bladder cancer associated
protein protein.
Length = 87
Score = 66.1 bits (154), Expect = 2e-10
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 268 THVMFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWN 405
+H MFM YL+ F LERKPCT+C++VFL + LICYS GNC ++
Sbjct: 24 SHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYSCWGNCFLYH 69
>AF053470-1|AAC06370.1| 87|Homo sapiens BC10 protein.
Length = 87
Score = 66.1 bits (154), Expect = 2e-10
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 268 THVMFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWN 405
+H MFM YL+ F LERKPCT+C++VFL + LICYS GNC ++
Sbjct: 24 SHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYSCWGNCFLYH 69
>AL109614-4|CAM19263.1| 62|Homo sapiens bladder cancer associated
protein protein.
Length = 62
Score = 58.8 bits (136), Expect = 3e-08
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 268 THVMFMVLYLIGFFLERKPCTVCSVVFLVTVILICYS 378
+H MFM YL+ F LERKPCT+C++VFL + LICYS
Sbjct: 24 SHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,853,254
Number of Sequences: 237096
Number of extensions: 1607654
Number of successful extensions: 2285
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2285
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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