Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B15
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025727-5|AAG23385.2|   89|Caenorhabditis elegans Hypothetical ...    66   4e-11
AB042633-1|BAA95694.1|   89|Caenorhabditis elegans bladder cance...    66   4e-11

>AC025727-5|AAG23385.2|   89|Caenorhabditis elegans Hypothetical
           protein Y73E7A.6 protein.
          Length = 89

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 25/56 (44%), Positives = 39/56 (69%)
 Frame = +1

Query: 277 MFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWNQCETEKYDS*PCS 444
           +FM  Y++GFFLER+PC +CS +F + + L+CYS   +C+FW  C T+K +   C+
Sbjct: 28  VFMWFYIVGFFLERRPCHICSGIFFIALSLLCYSDPDSCIFWPTC-TKKLNGEVCT 82


>AB042633-1|BAA95694.1|   89|Caenorhabditis elegans bladder cancer
           related protein protein.
          Length = 89

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 25/56 (44%), Positives = 39/56 (69%)
 Frame = +1

Query: 277 MFMVLYLIGFFLERKPCTVCSVVFLVTVILICYSGIGNCLFWNQCETEKYDS*PCS 444
           +FM  Y++GFFLER+PC +CS +F + + L+CYS   +C+FW  C T+K +   C+
Sbjct: 28  VFMWFYIVGFFLERRPCHICSGIFFIALSLLCYSDPDSCIFWPTC-TKKLNGEVCT 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,278,382
Number of Sequences: 27780
Number of extensions: 295562
Number of successful extensions: 573
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)