Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B14
         (921 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    25   0.97 
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    23   3.0  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    23   3.0  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    23   3.0  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    23   3.0  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    23   3.0  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    23   3.0  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    23   3.0  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    23   3.0  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    23   3.0  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    23   3.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.9  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   6.8  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 499 KYYNTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           KY N NN+ + +N   N  N  N+N   L +N +Y
Sbjct: 323 KYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINY 357


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N+  + +N   N  N+  HN   L +N +Y
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 496 YYNTNNWQH*HNVTLNRTNFRNHNCFF 416
           +Y  +NW    N  LN+    + +CFF
Sbjct: 540 FYEIDNWMLDLNSGLNKITRNSLDCFF 566


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 496 YYNTNNWQH*HNVTLNRTNFRNHNCFF 416
           +Y  +NW    N  LN+    + +CFF
Sbjct: 540 FYEIDNWMLDLNSGLNKITRNSLDCFF 566


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 490 NTNNWQH*HNVTLNRTNFRNHNCFFLTHNTSY 395
           N N   + +N   N  N+  HN   L +N +Y
Sbjct: 84  NNNPLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,958
Number of Sequences: 438
Number of extensions: 2823
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)