Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B13
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0302 + 16501020-16501049,16501568-16501659,16502063-165021...    31   0.93 
10_06_0060 + 10184165-10185002,10185084-10185167,10185262-10186334     30   2.8  
01_02_0090 + 11012325-11012463,11012543-11012797,11013001-110130...    30   2.8  
05_01_0214 - 1615519-1616775                                           29   6.6  
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355     29   6.6  
01_03_0014 + 11655216-11655287,11657833-11658048,11659848-116619...    28   8.7  

>09_04_0302 +
           16501020-16501049,16501568-16501659,16502063-16502198,
           16502297-16502727,16502950-16503028
          Length = 255

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 486 VRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVG 388
           V  SS+ S+E H +HY  G    H HQ  D VG
Sbjct: 117 VGSSSSDSLEHHSNHYCNGGHHHHGHQCYDSVG 149


>10_06_0060 + 10184165-10185002,10185084-10185167,10185262-10186334
          Length = 664

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 372 QLHACHLRDL-HAGVDGTETDLGRNGVCESRRSSCCYPELD 491
           +L+AC    L  AG +   T  GR G     +S CCYP  D
Sbjct: 147 RLYACEDSSLCRAGCEDVAT-CGRGGAAAGAKSGCCYPLSD 186


>01_02_0090 +
           11012325-11012463,11012543-11012797,11013001-11013081,
           11013164-11013234,11013400-11013432,11015658-11016047
          Length = 322

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 69  LVGPHVDLQIYYHLHISAQLNNKMGCGEFLVKY 167
           +V  +VDL + Y  HI+ ++ N+ G  ++L KY
Sbjct: 205 VVAHNVDLLVKYQAHINVEIVNRDGMEKYLFKY 237


>05_01_0214 - 1615519-1616775
          Length = 418

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 453 HKHHYAQGQFQCHQHQHEDRVGDKHAVAL 367
           H HH+ + Q   H H HED  G+   V L
Sbjct: 207 HDHHHHEDQEHGHVHHHEDGHGNSITVNL 235


>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
          Length = 1109

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 453 HKHHYAQGQFQCHQHQHEDRVGDK 382
           H+HH+ Q Q   H HQ + R G +
Sbjct: 139 HRHHHHQRQRHHHHHQRQQRRGSR 162


>01_03_0014 +
           11655216-11655287,11657833-11658048,11659848-11661912,
           11662966-11663013,11663081-11663328,11663429-11663558,
           11663707-11663983,11664102-11664180,11664311-11664397,
           11664586-11664618
          Length = 1084

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 529 VIEHRFSCCGPTGPGSYLSLDPAHN 603
           ++  +FS CG  GP  Y++  P +N
Sbjct: 794 IVTDKFSDCGDNGPSQYIAPTPVNN 818


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,191,111
Number of Sequences: 37544
Number of extensions: 448012
Number of successful extensions: 1196
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)