Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B12
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   6.6  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   6.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   8.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.7  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 76  RFNKLIKCVTK 44
           RFNKL+KC  K
Sbjct: 115 RFNKLVKCFGK 125


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 76  RFNKLIKCVTK 44
           RFNKL+KC  K
Sbjct: 115 RFNKLVKCFGK 125


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 350 TLKAQIGLKVLGDFAH*SLKRQLADQKLGAFLVSPYLSEGYG 225
           T+K+ +  K L    H  L+ +  D +L    ++PYL++ YG
Sbjct: 49  TIKSNMA-KTLQFDVHMMLQFRYLDARLKFSNIAPYLNQIYG 89


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 415 TCAPFMPKGSPLCQRIFSWRGECGENEPKLKE 510
           +CAP  P  S LCQ+     G    N  ++++
Sbjct: 533 SCAPGAPLDSKLCQQCV---GNLASNNDRIRQ 561


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 415 TCAPFMPKGSPLCQRIFSWRGECGENEPKLKE 510
           +CAP  P  S LCQ+     G    N  ++++
Sbjct: 533 SCAPGAPLDSKLCQQCV---GNLASNNDRIRQ 561


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 415 TCAPFMPKGSPLCQRIFSWRGECGENEPKLKE 510
           +CAP  P  S LCQ+     G    N  ++++
Sbjct: 533 SCAPGAPLDSKLCQQCV---GNLASNNDRIRQ 561


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,610
Number of Sequences: 438
Number of extensions: 3674
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)