Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B09
         (904 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24246 Cluster: Dynein intermediate chain, cytosolic; n...    83   9e-15
UniRef50_A4F9C8 Cluster: Probable alpha-glucosidase; n=1; Saccha...    37   0.61 
UniRef50_Q4QE97 Cluster: Formin, putative; n=3; Leishmania|Rep: ...    36   1.4  
UniRef50_Q5LLX9 Cluster: Sugar ABC transporter, permease protein...    35   2.5  
UniRef50_A2XL20 Cluster: Putative uncharacterized protein; n=1; ...    35   3.3  
UniRef50_A4SQ01 Cluster: Pentapeptide repeat; n=1; Aeromonas sal...    33   7.5  

>UniRef50_Q24246 Cluster: Dynein intermediate chain, cytosolic;
           n=55; Eumetazoa|Rep: Dynein intermediate chain,
           cytosolic - Drosophila melanogaster (Fruit fly)
          Length = 663

 Score = 83.0 bits (196), Expect = 9e-15
 Identities = 55/131 (41%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
 Frame = +3

Query: 369 DRKAELERKKAKLXXXXXXXXXXXXXXXXXXXXXXLQRASATSSLDS--RRDIDEMLSSL 542
           DRKAELERKKAKL                        R    + +D   R+D+DEMLSSL
Sbjct: 2   DRKAELERKKAKLAALREEKDRRRREKEIKDMEEAAGRIGGGAGIDKDQRKDLDEMLSSL 61

Query: 543 GVAPVKDVXXXXXXXXXXXPPQ--TASPDASLPHTDKASLQLQGGPKKQPQELQVVFVQS 716
           GVAPV +V                T +PDASL    +A++  Q G KKQP  L V  VQ+
Sbjct: 62  GVAPVSEVLSSLSSVNSMTSDNSNTQTPDASL----QATVNGQSGGKKQPLNLSVYNVQA 117

Query: 717 TDIPPKETVIY 749
           T+IPPKET++Y
Sbjct: 118 TNIPPKETLVY 128


>UniRef50_A4F9C8 Cluster: Probable alpha-glucosidase; n=1;
           Saccharopolyspora erythraea NRRL 2338|Rep: Probable
           alpha-glucosidase - Saccharopolyspora erythraea (strain
           NRRL 23338)
          Length = 346

 Score = 37.1 bits (82), Expect = 0.61
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -2

Query: 486 MPVAVLLQHLSVLFLCGADLYPLLWRGASPSFA-PTQPSD-PTCSTSW*LLTNTAKISTS 313
           +P A  L+H   L L GA   P+ W G  P F    +P + P+ S  W   T  A++   
Sbjct: 204 LPGAACLRHGEELGLPGAQRIPMPWEGQDPPFGFSERPGEWPSISADWASFTVEAQLEDP 263

Query: 312 ESY**LYR 289
           ES   LYR
Sbjct: 264 ESTLSLYR 271


>UniRef50_Q4QE97 Cluster: Formin, putative; n=3; Leishmania|Rep:
           Formin, putative - Leishmania major
          Length = 1300

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +2

Query: 593 TVSTSDSLSRCQFTAYR*SQPTIARRSKEATSRITSRLRAVHGHTAQGDGDLYEANA 763
           T + +D++ R    A R  +P+++R +K  ++R+TSRL     H  +  G   EA +
Sbjct: 350 TAAVADTMQRAALPAKRSRRPSLSREAKNVSTRLTSRLDLPSLHVVRTGGGAAEAGS 406


>UniRef50_Q5LLX9 Cluster: Sugar ABC transporter, permease protein;
           n=2; Rhodobacteraceae|Rep: Sugar ABC transporter,
           permease protein - Silicibacter pomeroyi
          Length = 285

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 495 MWPMPVAVLLQHLSVLFLCGADLYPLLWRGASPSFAPTQPSDPTCSTSW 349
           M P P A+ L++L VL  C   LYPLLW   + +F P          +W
Sbjct: 1   MKPSPGALALKYLFVLLACAVVLYPLLWM-VTMAFKPYPEWTTVAGLTW 48


>UniRef50_A2XL20 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 535

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -2

Query: 804 QSSRSSVTPRXWWSAFASYRSPSPWAVCPWTARRRLVILEVASLDRLAIVGWLYLYAVNW 625
           ++SR SVTP        +Y + +  A  P    ++ ++   AS D LA +G++YL+A+  
Sbjct: 219 EASRRSVTPSA--GVHEAYAAAAAAAFHPAPLAQQELL---ASPDNLAKLGFVYLHALQ- 272

Query: 624 HLERL-SEVETVKSLMIKKRGHP*LEPLQARTASRQCHD 511
           H +RL S+  T+ SL+ +KR H  L   Q     R C+D
Sbjct: 273 HGDRLCSDDVTLISLLFRKR-HFELRHQQQPEPKRLCND 310


>UniRef50_A4SQ01 Cluster: Pentapeptide repeat; n=1; Aeromonas
           salmonicida subsp. salmonicida A449|Rep: Pentapeptide
           repeat - Aeromonas salmonicida (strain A449)
          Length = 282

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -2

Query: 690 LEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP*LEPLQAR 535
           L  A LD + ++G      + WH  RL  + T K LM ++RG    +P QAR
Sbjct: 113 LHCAELDNVNLLG------IRWHNTRLDNLNTGKRLMQERRGRSERDPAQAR 158


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,878,278
Number of Sequences: 1657284
Number of extensions: 13614956
Number of successful extensions: 33420
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33349
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)