Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B09
         (904 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.46 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   7.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   7.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   7.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   7.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   7.6  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   7.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   7.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 220 SELGFIEHPVTHHLFATFCRHFY 288
           S LG +E   THHL + + RH Y
Sbjct: 140 SLLGKVEGAATHHLGSVYSRHPY 162


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 17/52 (32%)
 Frame = -2

Query: 714 TARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP 559
           T RRR+ I     L    I  W     + W  E       +    +   GHP
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHP 297


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 17/52 (32%)
 Frame = -2

Query: 714 TARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP 559
           T RRR+ I     L    I  W     + W  E       +    +   GHP
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHP 297


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 17/52 (32%)
 Frame = -2

Query: 714 TARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP 559
           T RRR+ I     L    I  W     + W  E       +    +   GHP
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHP 297


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 17/52 (32%)
 Frame = -2

Query: 714 TARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP 559
           T RRR+ I     L    I  W     + W  E       +    +   GHP
Sbjct: 202 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHP 253


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 17/52 (32%)
 Frame = -2

Query: 714 TARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP 559
           T RRR+ I     L    I  W     + W  E       +    +   GHP
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHP 297


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 17/52 (32%)
 Frame = -2

Query: 714 TARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP 559
           T RRR+ I     L    I  W     + W  E       +    +   GHP
Sbjct: 34  TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHP 85


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 17/52 (32%)
 Frame = -2

Query: 714 TARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVETVKSLMIKKRGHP 559
           T RRR+ I     L    I  W     + W  E       +    +   GHP
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHP 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,461
Number of Sequences: 336
Number of extensions: 3517
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)