Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_B09
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   4.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   9.6  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 199 VHKFGVF*KLFLYLSVIPDNCRIN 128
           VH+ G+  K F YLSV  D  R N
Sbjct: 782 VHELGLAHKYFTYLSVHGDKTRYN 805


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 606 QTASPDASLPHTDKASLQLQGGPKKQPQELQ 698
           Q   P  SLPH  +  LQL    ++Q Q+ Q
Sbjct: 375 QQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQ 405


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 720 PWTARRRLVILEVASLDRLAIVGWLYLYAVNWHLERLSEVE 598
           P  A+RRL+     S+ R A   W     + W   +L++V+
Sbjct: 778 PQVAKRRLLAAVAESIIRYAAPVWSEATDLQWCQRKLAQVQ 818


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 430 IGAAEKKNRKMLKKHCNGHRPHLAWTVVVTLTR 528
           I A EK  ++M     + HR    WT ++ L R
Sbjct: 328 ISACEKTMQRMTSSFPDPHRDVYWWTPLIALLR 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,973
Number of Sequences: 2352
Number of extensions: 14752
Number of successful extensions: 91
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)