Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_B04
(887 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 229 3e-62
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 229 3e-62
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 8.6
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 229 bits (560), Expect = 3e-62
Identities = 107/136 (78%), Positives = 116/136 (85%)
Frame = +2
Query: 272 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 451
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 452 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 631
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 632 XXXXXXXTSLCFVYPL 679
TSLCFVYPL
Sbjct: 121 SGGAAGATSLCFVYPL 136
Score = 138 bits (333), Expect = 8e-35
Identities = 61/71 (85%), Positives = 68/71 (95%)
Frame = +3
Query: 675 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 854
PLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YF
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYF 194
Query: 855 GFYDTARGMLP 887
GFYDTARGMLP
Sbjct: 195 GFYDTARGMLP 205
Score = 28.7 bits (61), Expect = 0.075
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +2
Query: 299 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 478
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 479 LSFWRGNFANVIRYFPTQALNFAFKD 556
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 359 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 517
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 675 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 806
P D R R+ G+ + + +C + I+K++G ++G
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 729 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 866
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 229 bits (560), Expect = 3e-62
Identities = 107/136 (78%), Positives = 116/136 (85%)
Frame = +2
Query: 272 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 451
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 452 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 631
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 632 XXXXXXXTSLCFVYPL 679
TSLCFVYPL
Sbjct: 121 SGGAAGATSLCFVYPL 136
Score = 138 bits (333), Expect = 8e-35
Identities = 61/71 (85%), Positives = 68/71 (95%)
Frame = +3
Query: 675 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 854
PLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YF
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYF 194
Query: 855 GFYDTARGMLP 887
GFYDTARGMLP
Sbjct: 195 GFYDTARGMLP 205
Score = 28.7 bits (61), Expect = 0.075
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +2
Query: 299 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 478
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 479 LSFWRGNFANVIRYFPTQALNFAFKD 556
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 359 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 517
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 675 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 806
P D R R+ G+ + + +C + I+K++G ++G
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 729 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 866
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 538 ERLGREVPDDVGEVTTPE 485
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -1
Query: 704 GKTGT--CEVQGGTRSTERWLR 645
G T T CEV G T T WL+
Sbjct: 822 GDTATLHCEVHGDTPVTVTWLK 843
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 538 ERLGREVPDDVGEVTTPE 485
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -1
Query: 704 GKTGT--CEVQGGTRSTERWLR 645
G T T CEV G T T WL+
Sbjct: 818 GDTATLHCEVHGDTPVTVTWLK 839
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 8.6
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 698 SCRRCR*GRWPA*ILRSRKLHQQDLQVRRSDRSVQRFRCVRAR 826
SC R R + R KLH + ++ S +R+ C R R
Sbjct: 236 SCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSCSRER 278
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,236
Number of Sequences: 438
Number of extensions: 5144
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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