Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_B02
(954 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.019
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.019
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.10
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.24
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 2.2
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.002
Identities = 25/83 (30%), Positives = 26/83 (31%), Gaps = 2/83 (2%)
Frame = +2
Query: 707 GRRGTXPXPXGGKXXXPPTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPX 886
GR P G P PP PP PP P + P P P PP P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP-PLPPSAPI 455
Query: 887 PP--XAGHPKXPXPXXXXGGPTP 949
P AG P P P P
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPPP 478
Score = 33.5 bits (73), Expect = 0.045
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +2
Query: 716 GTXPXPXGGKXXXPPTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPX 895
G+ P P G+ PP P P PP NP P P P P
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 896 AGHPKXP 916
A P
Sbjct: 409 ASRTSTP 415
Score = 33.5 bits (73), Expect = 0.045
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Frame = +2
Query: 725 PXPXGGKXXXPPT-PXGDPPGXXXXXP--PXXPPXRPXNPXKKR--PXXPXPXPPXXPXP 889
P P PP+ P PP P P PP P P P P P PP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP-PLPPAAPAP 476
Query: 890 PXAGHPKXPXP 922
P A P P
Sbjct: 477 PPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 25/95 (26%), Positives = 28/95 (29%), Gaps = 2/95 (2%)
Frame = +3
Query: 675 DPPXPRPXRXXGAAGPX--PXQXAGXPXXPPHPXGIPRGKXPXAPQXXHQXGPXTPXKSA 848
+PP P P G + P P A PP P P P AP P + A
Sbjct: 387 NPPAP-PPAIPGRSAPALPPLGNASRTSTPPVPT--PPSLPPSAPPSLPPSAPPSLPMGA 443
Query: 849 XXXPXXXPXXXPXPPSXXIQKXRXPXXQXGGQPPP 953
P P PP P PPP
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/65 (32%), Positives = 24/65 (36%)
Frame = +3
Query: 678 PPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGIPRGKXPXAPQXXHQXGPXTPXKSAXXX 857
PP P P R AAG P G PP P PR AP Q P + ++
Sbjct: 337 PPPPPPPR-SNAAGSIPLPPQGRSAPPPPP---PRS----APSTGRQPPPLSSSRAVSNP 388
Query: 858 PXXXP 872
P P
Sbjct: 389 PAPPP 393
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 758 PTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXP 889
P P P PP PP RP P P P P P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPP-RPIAPVSMNPAINSTSKPPLPPP 295
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 800 PPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXP 916
PP P P ++ P P PP P PP G P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIP-PPSNGTVSSP 267
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +2
Query: 755 PPTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXPXPXXXX 934
PP P PP P PP P P P P PP P A P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Query: 935 GGPTP 949
G P
Sbjct: 225 AGHAP 229
Score = 32.7 bits (71), Expect = 0.078
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Frame = +2
Query: 755 PPTPXGDPPGXXXXXP---PXXPPXRPXNPXKKRPXXPX------PXPPXXPXPPXAGHP 907
PP+P PP P PP +P P K P P P PP P PP + P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 30.3 bits (65), Expect = 0.42
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 5/59 (8%)
Frame = +2
Query: 755 PPTPXGD--PPGXXXXXPPXXPPX---RPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXP 916
PPTP + PP P PP P P K P PP P P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/50 (28%), Positives = 18/50 (36%)
Frame = +3
Query: 657 PXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGIPRGKXPXAPQ 806
P P PP P ++ P P Q A PP +P P P+
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/57 (28%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Frame = +2
Query: 755 PPTPXGDPPGXXXXXPPXXPPXRPXNP---XKKRPXXPXPXPPXXPXPPXAGHPKXP 916
PP+ P PP P RP P P P PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.019
Identities = 28/104 (26%), Positives = 32/104 (30%), Gaps = 3/104 (2%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXG---IPRGKXPXAPQXXHQX 821
P P P PP P+P AA P P P P P G +P+ P
Sbjct: 1084 PVPAPSGI-PPVPKPSV---AAPPVPKPSVAVPPVPA-PSGAPPVPKPSVAAPPVPVPSG 1138
Query: 822 GPXTPXKSAXXXPXXXPXXXPXPPSXXIQKXRXPXXQXGGQPPP 953
P P S P P P P + P G P P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 33.9 bits (74), Expect = 0.034
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 7/86 (8%)
Frame = +2
Query: 716 GTXPXPXGGKXXXP-PTPXGDPP--GXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPX 886
G P P P P P G PP PP P P K P PP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 887 PPX----AGHPKXPXPXXXXGGPTPT 952
PP G P P P PTP+
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 32.7 bits (71), Expect = 0.078
Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Frame = +3
Query: 657 PXP-PXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGI----PRGKXPXAPQXXHQX 821
P P P PP P+P AA P P +G P P G+ P + P P+
Sbjct: 1151 PVPAPSGAPPVPKPSV---AAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 822 GPXTPXKSAXXXPXXXPXXXPXP 890
P P +A P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 31.5 bits (68), Expect = 0.18
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGIPRGKXPXAPQXXHQXGPX 830
P P P PP P P A P P P P GI P P+ P
Sbjct: 1141 PVPKPSVAAPPVPAP----SGAPPVPKPSVAAPPVPAPSSGI-----PPVPKPAAGVPPV 1191
Query: 831 TPXKSAXXXPXXXPXXXPXPP 893
P A P P PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPP 1212
Score = 30.7 bits (66), Expect = 0.32
Identities = 25/93 (26%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Frame = +2
Query: 707 GRRGTXPXPXGGKXXXPP--------TPXGDPPGXXXXXPPXXPP--XRPXNPXKKRPXX 856
GR+ + P P PP +P +PP P P P P + P
Sbjct: 955 GRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPV 1014
Query: 857 PXPXPPXXPXP-PXAGHPKXPXPXXXXGGPTPT 952
P P P P A P P P P PT
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPT 1047
Score = 29.9 bits (64), Expect = 0.55
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 758 PTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXPXP 922
P P G PP P PP P P P P P P +G P P P
Sbjct: 1077 PAPSGAPP---VPAPSGIPPV--PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 29.5 bits (63), Expect = 0.73
Identities = 27/105 (25%), Positives = 30/105 (28%), Gaps = 5/105 (4%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXG-----AAGPXPXQXAGXPXXPPHPXGIPRGKXPXAPQXXH 815
P P P PP P P + P P +G P PP P P + P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP-PVPAPSSEIPSIPAP-- 1079
Query: 816 QXGPXTPXKSAXXXPXXXPXXXPXPPSXXIQKXRXPXXQXGGQPP 950
P P S P PP P G PP
Sbjct: 1080 SGAPPVPAPSG--IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 29.5 bits (63), Expect = 0.73
Identities = 28/101 (27%), Positives = 30/101 (29%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGIPRGKXPXAPQXXHQXGPX 830
P P P PP P P A P P G P PP P P P A P
Sbjct: 1180 PVPKPAAGVPPVPPP----SEAPPVPKPSVGVPPVPP-PSTAPPVPTPSAGL------PP 1228
Query: 831 TPXKSAXXXPXXXPXXXPXPPSXXIQKXRXPXXQXGGQPPP 953
P +A P P PS + P P P
Sbjct: 1229 VPVPTAKAPP--VPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 29.1 bits (62), Expect = 0.97
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +2
Query: 725 PXPXGGKXXXPPTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAGH 904
P P G P G PP PP P P P P P P P AG
Sbjct: 1172 PAPSSGIPPVPKPAAGVPP----VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS-AGL 1226
Query: 905 PKXPXP 922
P P P
Sbjct: 1227 PPVPVP 1232
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/100 (22%), Positives = 25/100 (25%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGIPRGKXPXAPQXXHQXGPX 830
P P P P P P P P P +P+ P P
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP--VPKPSVAVPPVPAPSGAPP 1122
Query: 831 TPXKSAXXXPXXXPXXXPXPPSXXIQKXRXPXXQXGGQPP 950
P S P P P P + P G PP
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSV--AAPPVPAPSGAPP 1160
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +2
Query: 725 PXPXGGKXXXPPTPXGDP-PGXXXXXPPXXPP-XRPXNPXKKRPXXPXPXPPXXPXPPXA 898
P P G PP P P PP PP P P P P P P A
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPA 1241
Query: 899 GHPKXP 916
+ P
Sbjct: 1242 PSSEAP 1247
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/77 (25%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Frame = +2
Query: 725 PXPXGGKXXXP-PTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAG 901
P P P P P PP P P P P P P P +G
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP-PPVPAPSSEIPSIPAPSG 1081
Query: 902 HPKXPXPXXXXGGPTPT 952
P P P P P+
Sbjct: 1082 APPVPAPSGIPPVPKPS 1098
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +2
Query: 782 GXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXPXPXXXXGGPTP 949
G P PP RP + + P P PP PP P P P P P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 755 PPTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXPXP 922
P P PP P P + P P P PP P P AG P P P
Sbjct: 1683 PAHPVSTPP----VRPQSAAPPQMSAPTPPPPPMSVPPPPSAP-PMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 758 PTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXP 889
PTP PP PP PP P P P P P P
Sbjct: 1705 PTPP--PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGIPRGKXPXAPQXXHQXGPX 830
P PP P P P P PP P G P P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 831 TPXKSA 848
+SA
Sbjct: 1746 PGDRSA 1751
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +2
Query: 776 PPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXP-PXAGHPKXPXP 922
PP PP PP P P P P P P P + P P P
Sbjct: 1699 PPQMSAPTPP--PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHPXGIPRGKXPXAP 803
P P PP P P P P P G P PP P G+ P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV---PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 826 PXPXKKAPXXXPPXXPXXAPAPXRXXSKXTXPPXXKXGANPHP 954
P P P P P PAP PP GA P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.5 bits (58), Expect = 2.9
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +2
Query: 755 PPTPXGDPPGXXXXXPPXXP-PXRPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXPXP 922
PP P PP P P P P P P P P PP P AG P P P
Sbjct: 732 PPPP---PPAVIVPTPAPAPIPVPPPAPIMGGP--PPPPPP--PGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 725 PXPXGGKXXXPPTPXGDPPGXXXXXPPXXPPXRP 826
P P P P PPG PP PP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 812 PPXRPXNPXKKRPXXPXPXPPXXPXPPXAGHPKXPXPXXXXG-GPTP 949
PP P P P PP P P G P P P G GP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPP--PAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 651 PXPXPPXXDPPXPRPXRXXGAAGPXPXQXAGXPXXPPHP 767
P P P P P P P P AG PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 9.0
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +3
Query: 657 PXPPXXDPPXPRPXRXXGAAGPXP----XQXAGXPXXPPHPXGIPRG 785
P P P P P G P P AG P PP P + G
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 800 PPXXPPXRPXNPXKKRPXXPXPXPP 874
PP PP P P + P P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 755 PPTPXGDP--PGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPPXAGHP 907
PP P G P P PP PP P P P P P P A P
Sbjct: 506 PPIP-GAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAP 557
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 758 PTPXGDPPGXXXXXPPXXPPXRPXNPXKKRPXXPXPXPPXXPXPP 892
P P +PP P P P P + P P P P P P
Sbjct: 102 PLPR-EPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,813,270
Number of Sequences: 5004
Number of extensions: 21806
Number of successful extensions: 178
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -