BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_B01
(865 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein... 122 2e-29
EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein. 25 3.9
AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 24 6.9
>AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein 70
protein.
Length = 78
Score = 122 bits (293), Expect = 2e-29
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 554 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDXKGTGERNVLIFDL 733
+AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLD GERNVLIFDL
Sbjct: 1 DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60
Query: 734 GGGYFDVSSL 763
GGG FDVS L
Sbjct: 61 GGGTFDVSIL 70
>EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein.
Length = 399
Score = 24.6 bits (51), Expect = 3.9
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Frame = +2
Query: 80 TFAELF*EQVTRLIKNTKWQKHPQ*ESIWVPRYSCVGVFQHGKVEIIANDQGNRT---TP 250
TF ELF L+ + P+ +W+P+++ H +++ G+ T
Sbjct: 268 TFEELFELLSAELLDELETSVAPKMVDLWLPKFTIED--SHDARDVLKR-MGHETLFDRE 324
Query: 251 SYVAFTDTERLIGDAAXNQ-VAMNPNNTIFDAKRLIGRKFEDATVQ 385
+ F D + ++G + V ++ N T A +G KF Q
Sbjct: 325 GFAVFRDHKSMLGALKQSTFVQVDENGTEAAAVTSVGTKFRVRNTQ 370
>AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein.
Length = 471
Score = 23.8 bits (49), Expect = 6.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 243 VLLPWSLAMISTFPCWKTPTQEXRGTQIDSYCGCFCHFVFLISLV 109
++L W L +I F W+ T R + Y + H+VFL+ ++
Sbjct: 344 LVLTW-LGVIFQF-LWRLGTVISRVISLTVYASVYSHWVFLVIIL 386
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 924,571
Number of Sequences: 2352
Number of extensions: 19918
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -