Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_A24
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1216 - 25344638-25345159,25346011-25346511                       31   0.93 
10_07_0144 - 13367579-13368805,13369540-13369578,13369662-133698...    30   2.8  
03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-65...    29   3.7  
02_04_0545 + 23778769-23779245,23779395-23779688                       28   8.6  

>08_02_1216 - 25344638-25345159,25346011-25346511
          Length = 340

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +1

Query: 625 FTVRTQSSSKNWISCAPIQKGKNKHGPLILIKKPKNGHVPSTHRTHH 765
           F    +S+ + W+ C    K  +++  L+++K P + ++P +H  HH
Sbjct: 159 FAAARRSTKEEWVICRIFHKVGDQYSKLMMMKSPASYYLPVSH--HH 203


>10_07_0144 -
           13367579-13368805,13369540-13369578,13369662-13369826,
           13370083-13370193
          Length = 513

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +1

Query: 664 SCAPIQKGKNKHGPLILIKKPKNG---HVPSTHRTHHSAYKGG 783
           +C+ +   ++       + KP NG   H P  H  HHSA  GG
Sbjct: 300 ACSEVSSNRDDEQIGNTVAKPANGLQQHPPPPHHHHHSAMNGG 342


>03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-653886,
            654027-654247,654395-654533,654628-654710,654824-655036,
            655099-655494,655587-655758,656085-656276,656363-656569,
            656661-656753,656957-657156,657329-657838,658114-658184,
            658322-658963,659057-659207,659425-659665
          Length = 1360

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
 Frame = +3

Query: 546  MPQGTVPTASFSEEYLKPEQLYASTMLHGSNSEFFQELDQLCSDPEREEQTRTIDSHKE- 722
            +P G++P    + E          T     N  F     Q C+ PE     R    H+  
Sbjct: 1097 IPDGSIPNTPNATENTSETSNVEETDATNQNYAFSNL--QSCNIPEVTPMHRFSGVHQSG 1154

Query: 723  ------TEKRACSFDTPHTSFC-LQGWDVQ 791
                  +E RACS+ TP  S+C + G D Q
Sbjct: 1155 VNCLHVSEMRACSYSTPGMSYCVISGGDDQ 1184


>02_04_0545 + 23778769-23779245,23779395-23779688
          Length = 256

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 714 HKETEKRACSFDTPHTSFCLQGWDVQDDNSP 806
           H +      + DTP   F  QGW +Q ++SP
Sbjct: 136 HHQQPAPTVAVDTPSPQFLPQGWALQKESSP 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,933,632
Number of Sequences: 37544
Number of extensions: 452632
Number of successful extensions: 1408
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)