Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_A24
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003493-1|AAO39497.1| 1035|Drosophila melanogaster RE49017p pro...    31   2.1  
AE014297-1841|AAF55048.2| 1021|Drosophila melanogaster CG8538-PA...    31   2.1  
AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA ...    30   4.9  

>BT003493-1|AAO39497.1| 1035|Drosophila melanogaster RE49017p
           protein.
          Length = 1035

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +3

Query: 537 NGVMPQGTVPTASFSEEYLKPEQLYASTMLHG-SNSEFFQELDQLCSDPEREEQTRTIDS 713
           N  MP+     +    + LKP+   A++ L   SNS  +Q L+   +    + +TRT  S
Sbjct: 496 NSSMPRFAANLSFDPLKPLKPQSTGAASSLEPISNSTSYQGLENAAATTASQTETRTGPS 555

Query: 714 HKETEKRACS 743
           H E    +CS
Sbjct: 556 HGEGSTGSCS 565


>AE014297-1841|AAF55048.2| 1021|Drosophila melanogaster CG8538-PA
           protein.
          Length = 1021

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +3

Query: 537 NGVMPQGTVPTASFSEEYLKPEQLYASTMLHG-SNSEFFQELDQLCSDPEREEQTRTIDS 713
           N  MP+     +    + LKP+   A++ L   SNS  +Q L+   +    + +TRT  S
Sbjct: 482 NSSMPRFAANLSFDPLKPLKPQSTGAASSLEPISNSTSYQGLENAAATTASQTETRTGPS 541

Query: 714 HKETEKRACS 743
           H E    +CS
Sbjct: 542 HGEGSTGSCS 551


>AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA
           protein.
          Length = 730

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 736 HVPSTHRTHHSAYKGGMYRTITLPTARQAFIVTPP 840
           + PST  T   +  G M ++ +LP AR+ ++V PP
Sbjct: 245 YAPSTFHTQFISQSGAMEKSYSLP-ARKPYVVVPP 278


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,328,113
Number of Sequences: 53049
Number of extensions: 799091
Number of successful extensions: 2790
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2790
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)