Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_A17
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0549 - 9395978-9396428,9396517-9396863                           32   0.70 
03_02_0548 - 9392048-9392501,9392596-9392939                           32   0.70 
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352...    31   0.93 
10_08_0371 + 17265691-17265788,17265873-17265971,17266586-172666...    31   1.2  
08_01_0250 - 2053568-2054021,2054413-2054801                           29   5.0  

>03_02_0549 - 9395978-9396428,9396517-9396863
          Length = 265

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 256 ECPANVGCSECSHCIASAINSFVASRNIWLPHETFFHFC 140
           +C  +V  S+C  C+ASA N  + S N       ++ +C
Sbjct: 82  QCRGDVSTSDCQACLASAANQILTSCNYQSDSRIWYDYC 120


>03_02_0548 - 9392048-9392501,9392596-9392939
          Length = 265

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 256 ECPANVGCSECSHCIASAINSFVASRNIWLPHETFFHFC 140
           +C  +V  S+C  C+ASA N  + S N       ++ +C
Sbjct: 81  QCRGDVSTSDCQACLASAANQILTSCNYQSDSRIWYDYC 119


>07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,
            3527015-3527500,3527580-3527792,3527885-3528174,
            3528276-3528418,3528633-3528855,3528983-3529160,
            3529598-3529867
          Length = 1073

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 267  AAKCEASVGNFLGEAEHYISAARQFIKAEMKLKSMKFYSPERENLEAGIGCFLQ-ALNKY 443
            +A+ EASV + +  +EH      + I   ++ K+ +  S +++N + G+  FL  AL+  
Sbjct: 815  SAEKEASVADSIKPSEHVTFINTKAISCPLENKASQPTSSKKKNRKGGLSLFLSGALDDT 874

Query: 444  PEKSP 458
            P+ SP
Sbjct: 875  PKPSP 879


>10_08_0371 +
           17265691-17265788,17265873-17265971,17266586-17266628,
           17267250-17267321,17267400-17267495,17267609-17267842,
           17267914-17268097,17268247-17268358,17268447-17268533,
           17268703-17268841,17269628-17269718,17270045-17270154,
           17270309-17270413,17270982-17271055,17271379-17271454,
           17271786-17272022,17272419-17272490,17273082-17273153,
           17273240-17273304,17273306-17273383,17273384-17273486,
           17273769-17273858,17274873-17274980,17275063-17275113,
           17276126-17276203,17276284-17276346,17276944-17277140,
           17277243-17277312,17277640-17277828
          Length = 1030

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +3

Query: 576 LMALWNLMILRIDSEKFSMALETANTICDSKLNIPEDLLTEVQVTRILLAILVKPADEDK 755
           L+  WN+++  +DSEK  M+++ A         I E  L E      L A + + A +  
Sbjct: 379 LLETWNVILGDVDSEKSPMSVDGAIAASSLFKIIVESHLKERDEQLALYAQIARSAADTT 438

Query: 756 PPSLKQLF 779
            P L QLF
Sbjct: 439 IPFLAQLF 446


>08_01_0250 - 2053568-2054021,2054413-2054801
          Length = 280

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -2

Query: 256 ECPANVGCSECSHCIASAINSFVASRNIWLPHETFFHFCIDVHVLF 119
           +C  +V   +C  C+A A    V + N  L    ++ +C   +V F
Sbjct: 96  QCRGDVSGGDCDACLAQAAKQMVTNCNYTLDSRIWYEYCFMRYVDF 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,281,593
Number of Sequences: 37544
Number of extensions: 444769
Number of successful extensions: 1141
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)