Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_A17
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical pr...    32   0.63 
Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical pr...    32   0.63 
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    32   0.63 
Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical pr...    31   1.4  

>Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +3

Query: 393 ENLEAGIGCFLQALNKYPEKSPIRTSLLMELASNLSTLGHKAEAISYYQQALDTVVDYTM 572
           + +E G+    ++L K  +          +L   L+TLG K+EA + YQ+A    V  T 
Sbjct: 613 DKVEQGVALMRKSL-KNADNEITDPKFYYQLGHGLTTLGRKSEADAVYQKAAQMGVFMTA 671

Query: 573 KLMALWNL 596
           +  +L+N+
Sbjct: 672 QQRSLYNI 679


>Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +3

Query: 393 ENLEAGIGCFLQALNKYPEKSPIRTSLLMELASNLSTLGHKAEAISYYQQALDTVVDYTM 572
           + +E G+    ++L K  +          +L   L+TLG K+EA + YQ+A    V  T 
Sbjct: 613 DKVEQGVALMRKSL-KNADNEITDPKFYYQLGHGLTTLGRKSEADAVYQKAAQMGVFMTA 671

Query: 573 KLMALWNL 596
           +  +L+N+
Sbjct: 672 QQRSLYNI 679


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
 Frame = +3

Query: 273 KCEASVGNFLGEAEHYISAAR-------QFIKAEMKLKSMKFYSPERENLEAGIGC-FLQ 428
           KC + VG F G  +  + + R       QFIKAE K  S K  + E E+  +  GC F  
Sbjct: 743 KCPSVVGLFEGAIKVKVDSTRSCEQCDAQFIKAEFKPNSGKPGAIEYES-SSYEGCIFCD 801

Query: 429 ALNKYPEKSPIRTSLLMELASNLST 503
           A+ KYP+   +  + L E +   +T
Sbjct: 802 AMKKYPDAINLNHAYLTEESRQRNT 826


>Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical
           protein C34C6.6b protein.
          Length = 500

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = +3

Query: 396 NLEAGIGCFLQALNKYPEKSPIRTSLLMELASNLSTLGHKAEAISYYQQALDTVVDYTMK 575
           NL       + +L     K+P    L   L + L+   H AEAIS Y++AL     Y   
Sbjct: 369 NLNRNFARAVDSLKLAISKNPTDARLWNRLGATLANGDHTAEAISAYREALKL---YPTY 425

Query: 576 LMALWNLMILRIDSEKFSMALE 641
           + A +NL I  +    +  AL+
Sbjct: 426 VRARYNLGISCMQLSSYDEALK 447


>Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical
           protein C34C6.6a protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = +3

Query: 396 NLEAGIGCFLQALNKYPEKSPIRTSLLMELASNLSTLGHKAEAISYYQQALDTVVDYTMK 575
           NL       + +L     K+P    L   L + L+   H AEAIS Y++AL     Y   
Sbjct: 371 NLNRNFARAVDSLKLAISKNPTDARLWNRLGATLANGDHTAEAISAYREALKL---YPTY 427

Query: 576 LMALWNLMILRIDSEKFSMALE 641
           + A +NL I  +    +  AL+
Sbjct: 428 VRARYNLGISCMQLSSYDEALK 449


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,688,116
Number of Sequences: 27780
Number of extensions: 414574
Number of successful extensions: 1106
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)