Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_A16
(947 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.074
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 35 0.098
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 33 0.23
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.23
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.39
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.39
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 32 0.69
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 32 0.69
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 32 0.69
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.91
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 31 0.91
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 31 1.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.2
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.1
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 30 2.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.7
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 4.9
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 4.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.9
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 4.9
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 29 4.9
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 29 4.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.9
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.4
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 29 6.4
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 6.4
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 6.8
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 28 8.5
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 28 8.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.5
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 28 8.5
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 28 8.5
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 28 8.5
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 28 8.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.5
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/62 (37%), Positives = 23/62 (37%)
Frame = +1
Query: 409 PGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPA 588
P G GG PP P G GGGG LPQ GGG G P P
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCG 79
Query: 589 GG 594
GG
Sbjct: 80 GG 81
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +1
Query: 409 PGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDA-XXP 585
P A GG P P G G P+ P GGG G P G A P
Sbjct: 70 PAPACGGGCGGGVAPAPIGGGYAQAPQAPIGGGYAAPQAPIGGGYGGAPIGGGSYAGAGP 129
Query: 586 AGG 594
GG
Sbjct: 130 IGG 132
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.074
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +1
Query: 424 GGXXRXXHPPXPFG*--GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPAGGX 597
GG PP P G G G P A GGG G P GP+ A PAG
Sbjct: 179 GGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGHP 238
Query: 598 G 600
G
Sbjct: 239 G 239
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.098
Identities = 25/73 (34%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXG--------GGXGXPPXX 561
GP G G P P G G GG G P R PA G G G P
Sbjct: 163 GPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPGPP 222
Query: 562 GPKDAXXPAGGXG 600
GP+ PAG G
Sbjct: 223 GPRGEAGPAGQPG 235
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPA-XXXGGGXGXPPXXGPKDAXX 582
GP G G + HP P G GG LP P GG G P G +
Sbjct: 173 GPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPG 232
Query: 583 PAGGXG 600
P G G
Sbjct: 233 PQGPPG 238
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 807 PXXPXXGXPRPPXX----PPPXXVAPXPXXXXXGXPPXXSXPXXXKXGPXP 947
P P G P PP PPP +P P G PP S P G P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = -1
Query: 719 PPXXXGGXVXGGGAXGXXPXXXXXXXXXXXXXXXGXTXXPPXPPAGXXASLGPXXGGXPX 540
PP + G G+ P T PP PPAG P G P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPP 299
Query: 539 PPP 531
PPP
Sbjct: 300 PPP 302
Score = 24.6 bits (51), Expect(2) = 5.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 805 PPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXGP 915
PPP P AP PP P P P GP
Sbjct: 329 PPPPPRQKRQAPERSPP-TGSPPTGSPPTGRPPRGGP 364
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 19/79 (24%), Positives = 21/79 (26%), Gaps = 4/79 (5%)
Frame = +1
Query: 481 GGXXPLPQXRXXPAXXXGGGXGXPPXXG----PKDAXXPAGGXGGXXVXPXXXXXXXXXX 648
G P P + P G PP G P+ P G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 649 XXXXXGKXPXAPPPXTXPP 705
G P PPP PP
Sbjct: 295 -----GSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 807 PXXPXXGXPRPPXX----PPPXXVAPXPXXXXXGXPPXXSXPXXXKXGPXP 947
P P G P PP PPP +P P G PP S P G P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = -1
Query: 719 PPXXXGGXVXGGGAXGXXPXXXXXXXXXXXXXXXGXTXXPPXPPAGXXASLGPXXGGXPX 540
PP + G G+ P T PP PPAG P G P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPP 320
Query: 539 PPP 531
PPP
Sbjct: 321 PPP 323
Score = 24.6 bits (51), Expect(2) = 5.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 805 PPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXGP 915
PPP P AP PP P P P GP
Sbjct: 350 PPPPPRQKRQAPERSPP-TGSPPTGSPPTGRPPRGGP 385
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 19/79 (24%), Positives = 21/79 (26%), Gaps = 4/79 (5%)
Frame = +1
Query: 481 GGXXPLPQXRXXPAXXXGGGXGXPPXXG----PKDAXXPAGGXGGXXVXPXXXXXXXXXX 648
G P P + P G PP G P+ P G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 649 XXXXXGKXPXAPPPXTXPP 705
G P PPP PP
Sbjct: 316 -----GSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 807 PXXPXXGXPRPPXX----PPPXXVAPXPXXXXXGXPPXXSXPXXXKXGPXP 947
P P G P PP PPP +P P G PP S P G P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = -1
Query: 719 PPXXXGGXVXGGGAXGXXPXXXXXXXXXXXXXXXGXTXXPPXPPAGXXASLGPXXGGXPX 540
PP + G G+ P T PP PPAG P G P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPP 305
Query: 539 PPP 531
PPP
Sbjct: 306 PPP 308
Score = 24.6 bits (51), Expect(2) = 5.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 805 PPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXGP 915
PPP P AP PP P P P GP
Sbjct: 335 PPPPPRQKRQAPERSPP-TGSPPTGSPPTGRPPRGGP 370
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 19/79 (24%), Positives = 21/79 (26%), Gaps = 4/79 (5%)
Frame = +1
Query: 481 GGXXPLPQXRXXPAXXXGGGXGXPPXXG----PKDAXXPAGGXGGXXVXPXXXXXXXXXX 648
G P P + P G PP G P+ P G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 649 XXXXXGKXPXAPPPXTXPP 705
G P PPP PP
Sbjct: 301 -----GSPPPPPPPRGSPP 314
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
G GG GG PP G G GGGG GGG G G
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGG 159
Query: 586 AGGXGG 603
GG GG
Sbjct: 160 GGGCGG 165
Score = 30.3 bits (65), Expect = 2.1
Identities = 31/110 (28%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Frame = +1
Query: 394 FXXXGPGGARGGXXRXXHPPXPFG*GXG-GGGXXPLPQXRXXPAXXXGGGXGXPPXXGPK 570
F G GG GG G G G GGG P P PA G G G G
Sbjct: 20 FPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPP---PACGGGCGGGGGGCGGGG 76
Query: 571 DAXXPAGGXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXPPXXXGG 720
GG GG G P PPP GG
Sbjct: 77 GGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -1
Query: 599 PXPPAGXXASLGPXXGGXPXPPPXXXAGXXRXWGRGXXXXXXXXXPNGXGGXXXRXXPPR 420
P PP G A + P G PPP G G G GG PPR
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPPR 830
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
G GG GG PP P G G GGGG GGG G P P
Sbjct: 37 GCGGGCGGGGGCAPPPAPCGGGCGGGG------------GGCGGGGGCAPPPAPCGGGCG 84
Query: 586 AGGXG 600
GG G
Sbjct: 85 GGGGG 89
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
G GG GG PP P G G GGGG GG G G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 120
Query: 586 AGGXGG 603
GG GG
Sbjct: 121 GGGCGG 126
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGG----GGXXPLPQXRXXPAXXXGGGXGXPPXXGPKD 573
G GG+ GG P G G GG GG P A GGG G G
Sbjct: 192 GGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSG 251
Query: 574 AXXPAGGXGG 603
+GG G
Sbjct: 252 GGYSSGGSSG 261
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
G GG GG PP P G G GGGG GGG G P P
Sbjct: 37 GCGGGCGGGGGCAPPPAPCGGGCGGGG------------GGCGGGGGCAPPPAPCGGGCG 84
Query: 586 AGGXG 600
GG G
Sbjct: 85 GGGGG 89
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
G GG GG PP P G G GGGG GG G G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 120
Query: 586 AGGXGG 603
GG GG
Sbjct: 121 GGGCGG 126
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGG----GGXXPLPQXRXXPAXXXGGGXGXPPXXGPKD 573
G GG+ GG P G G GG GG P A GGG G G
Sbjct: 192 GGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSG 251
Query: 574 AXXPAGGXGG 603
+GG G
Sbjct: 252 GGYSSGGSSG 261
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -1
Query: 599 PXPPAGXXASLGPXXGGXPXPPPXXXAGXXRXWGRGXXXXXXXXXPNGXGGXXXRXXPPR 420
P PP G A + P G PPP G G G GG PPR
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPPR 830
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = -1
Query: 599 PXPPAGXXASLGPXXGGXPXPP-PXXXAGXXRXWGR-GXXXXXXXXXPNGXGGXXXRXXP 426
P P G + GP PP P +G GR G NG G P
Sbjct: 199 PIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGDCGHCPP 258
Query: 425 PRAPPG 408
PR PPG
Sbjct: 259 PRTPPG 264
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = -1
Query: 599 PXPPAGXXASLGPXXGGXPXPP-PXXXAGXXRXWGR-GXXXXXXXXXPNGXGGXXXRXXP 426
P P G + GP PP P +G GR G NG G P
Sbjct: 263 PIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGDCGHCPP 322
Query: 425 PRAPPG 408
PR PPG
Sbjct: 323 PRTPPG 328
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = -1
Query: 599 PXPPAGXXASLGPXXGGXPXPP-PXXXAGXXRXWGR-GXXXXXXXXXPNGXGGXXXRXXP 426
P P G + GP PP P +G GR G NG G P
Sbjct: 263 PIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGDCGHCPP 322
Query: 425 PRAPPG 408
PR PPG
Sbjct: 323 PRTPPG 328
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXX-GGGXGXPPXXGPKDAXX 582
GP G G + P P G GG P P GG G P G A
Sbjct: 170 GPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGGAGAPG 229
Query: 583 PAGGXG 600
PAG G
Sbjct: 230 PAGAPG 235
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXX-GGGXGXPPXXGPKDAXX 582
GP G G + P P G GG P P GG G P G A
Sbjct: 170 GPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPG 229
Query: 583 PAGGXG 600
PAG G
Sbjct: 230 PAGAPG 235
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +1
Query: 412 GGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPAG 591
GG +GG + G G GGGG P + GGG G P P G
Sbjct: 824 GGYQGGGYGGGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPPGYQRPPYRGGGGG 883
Query: 592 GXGG 603
G G
Sbjct: 884 GYHG 887
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = -1
Query: 602 PPXPP--AGXXASLGPXXGGXPXP--PPXXXAGXXRXWGRGXXXXXXXXXPNGXGGXXXR 435
P PP AG G GG P P PP G G +G G
Sbjct: 269 PQGPPGLAGPDGQPGHGGGGQPGPQGPPGDDGHPGEDGGAGGPGQPGQDGGSGGSGACDH 328
Query: 434 XXPPRAPPG 408
PPR PG
Sbjct: 329 CPPPRVAPG 337
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 448 PPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPAGGXG 600
PP P G G G P P GG G P GP PAG G
Sbjct: 187 PPGPAG-PAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDG 236
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 4/69 (5%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGG----GXGXPPXXGPKD 573
GP G G P P G GG P P PA G G G P GPK
Sbjct: 192 GPAGNDGAPGAPGGPGEP-GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKG 250
Query: 574 AXXPAGGXG 600
AG G
Sbjct: 251 PPGAAGAPG 259
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 448 PPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPAGGXG 600
PP P G G G P P GG G P GP PAG G
Sbjct: 187 PPGPAG-PAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDG 236
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 4/69 (5%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGG----GXGXPPXXGPKD 573
GP G G P P G GG P P PA G G G P GPK
Sbjct: 192 GPAGNDGAPGAPGGPGEP-GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKG 250
Query: 574 AXXPAGGXG 600
AG G
Sbjct: 251 PPGAAGAPG 259
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 448 PPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPAGGXG 600
PP P G G G P P GG G P GP PAG G
Sbjct: 187 PPGPAG-PAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDG 236
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 4/69 (5%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGG----GXGXPPXXGPKD 573
GP G G P P G GG P P PA G G G P GPK
Sbjct: 192 GPAGNDGAPGAPGGPGEP-GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKG 250
Query: 574 AXXPAGGXG 600
AG G
Sbjct: 251 PPGAAGAPG 259
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 448 PPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPAGGXG 600
PP P G G G P P GG G P GP PAG G
Sbjct: 187 PPGPAG-PAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDG 236
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 4/69 (5%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGG----GXGXPPXXGPKD 573
GP G G P P G GG P P PA G G G P GPK
Sbjct: 192 GPAGNDGAPGAPGGPGEP-GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKG 250
Query: 574 AXXPAGGXG 600
AG G
Sbjct: 251 PPGAAGAPG 259
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
GP G G + P P G G GG P GGG G G
Sbjct: 278 GPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYS 337
Query: 586 AGGXGG 603
GG GG
Sbjct: 338 TGGGGG 343
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
G GG GG G G G P PQ PA GGG G
Sbjct: 362 GGGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGGGGGY 421
Query: 586 AGGXG 600
AGG G
Sbjct: 422 AGGAG 426
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXP 585
GPG G + P P GGGG P GGG G G
Sbjct: 297 GPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGG 356
Query: 586 AGGXGG 603
AGG G
Sbjct: 357 AGGYSG 362
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGG-GGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXX 582
GPGG+ G + P P G G G P P G PP GP
Sbjct: 113 GPGGSPGKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPPGPP--GPDGPAG 170
Query: 583 PAGGXG 600
PAG G
Sbjct: 171 PAGPDG 176
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXGP 915
PPPP P + PA P PP + P P P
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXGP 915
PPPP P + PA P PP + P P P
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 335
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 914 GPXXGXPXXXGXWXGXXXXRG-GXXGGAGXXVXGXGGGG 801
G G G W G RG G GG G G GGGG
Sbjct: 235 GGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGG 273
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPA-XXXGGGXGXPPXXGPKDAXX 582
GP G G + HP P G GG LP P GG G P G
Sbjct: 180 GPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPG 239
Query: 583 PAGGXG 600
G G
Sbjct: 240 QPGAPG 245
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Frame = +1
Query: 406 GPGGARGGXXRXXHP--PXPFG*GXGGGGXXPLPQXRXXPAXXXG----GGXGXPPXXGP 567
GP G G + P P G GG P P PA G G G GP
Sbjct: 204 GPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGP 263
Query: 568 KDAXXPAGGXG 600
K PAG G
Sbjct: 264 KGPPGPAGQPG 274
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 816 PXXGXPRPPXXPPPXXVAPXPXXXXXGXPPXXSXP 920
P G P PP PP P P G PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP 742
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 602 PPXPPAGXXASLGPXXGGXPXPPP 531
PP PP G L P GG P PPP
Sbjct: 727 PPPPPPG---GLPPITGGPPPPPP 747
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 795 GRXXPXXPXXGXPRPPXXPPPXXVAPXPXXXXXGXPPXXSXPXXXKXGPXP 947
G P P G P PPP P P PP P K GP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 602 PPXPPAGXXASLGPXXGGXPXPPP 531
PP PP G L P GG P PPP
Sbjct: 743 PPPPPPG---GLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 760 PPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 816 PXXGXPRPPXXPPPXXVAPXPXXXXXGXPPXXSXP 920
P G P PP PP P P G PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP 742
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 602 PPXPPAGXXASLGPXXGGXPXPPP 531
PP PP G L P GG P PPP
Sbjct: 727 PPPPPPG---GLPPITGGPPPPPP 747
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 795 GRXXPXXPXXGXPRPPXXPPPXXVAPXPXXXXXGXPPXXSXPXXXKXGPXP 947
G P P G P PPP P P PP P K GP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 602 PPXPPAGXXASLGPXXGGXPXPPP 531
PP PP G L P GG P PPP
Sbjct: 743 PPPPPPG---GLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 760 PPPPPPGGCPPPPPPPPP 777
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPP--XXGPKDAX 579
GP GG PP G G GG P GG G PP GP
Sbjct: 153 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPG 212
Query: 580 XPAGGXGG 603
P GG GG
Sbjct: 213 GP-GGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPP--XXGPKDAX 579
GP GG PP G G GG P GG G PP GP
Sbjct: 433 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPG 492
Query: 580 XPAGGXGG 603
P GG GG
Sbjct: 493 GP-GGPGG 499
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 816 PXXGXPRPPXXPPPXXVAPXPXXXXXGXPPXXSXP 920
P G P PP PP P P G PP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP 325
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 602 PPXPPAGXXASLGPXXGGXPXPPP 531
PP PP G L P GG P PPP
Sbjct: 310 PPPPPPG---GLPPITGGPPPPPP 330
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 795 GRXXPXXPXXGXPRPPXXPPPXXVAPXPXXXXXGXPPXXSXPXXXKXGPXP 947
G P P G P PPP P P PP P K GP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 602 PPXPPAGXXASLGPXXGGXPXPPP 531
PP PP G L P GG P PPP
Sbjct: 326 PPPPPPG---GLPPISGGPPPPPP 346
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 342 PPPPPPPGGCPPPPPPPP 359
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 343 PPPPPPGGCPPPPPPPPP 360
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -2
Query: 946 GXGPXXXXXGXDXXGGXPXXXXFGXGATXXGGGXXGGRGXPXXGXXG 806
G G G D G G G + GGG GGRG G G
Sbjct: 70 GQGSGGQSGGSDPYGQSRGGGRGGFGGSRGGGGYDGGRGGSRGGYDG 116
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 478 GGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPA 588
GG P+P P G G G P GP D P+
Sbjct: 923 GGFIPPIPVPNPIPKPNPGPGPGPPSPNGPSDPNKPS 959
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXP 873
PPPP P P PP PP P
Sbjct: 579 PPPPPPMLGGPPPPPPPPGGLMGP 602
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 52 PPPPPPAPKVPEPPKAPP 69
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 53 PPPPPPAPKVPEPPKAPP 70
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 56 PPPPCPAQFCPPPPICPP 73
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 805 PPPXPXTXXPAPPXXPPRXXXXPXQXP 885
PPP P A P PPR P Q P
Sbjct: 1286 PPPPPYNQASAVPLNPPRTALPPLQLP 1312
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 451 PXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXG 546
P PF G GGGG P + P GG G
Sbjct: 135 PSPFSMGGGGGGSQGGPHEQHGPGGNQNGGFG 166
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 451 PXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXG 546
P PF G GGGG P + P GG G
Sbjct: 217 PSPFSMGGGGGGSQGGPHEQHGPGGNQNGGFG 248
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXP 495
G GG+ GG R PP P+G GGG P
Sbjct: 200 GSGGSGGGSGRFPPPPPPYG---GGGRRRP 226
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.4
Identities = 23/91 (25%), Positives = 24/91 (26%), Gaps = 1/91 (1%)
Frame = +1
Query: 451 PXPFG*GXGGGGXXPLPQXRXXPAXXXGGGXGXPPXXGPKDAXXPAGGXGGXXVXPXXXX 630
P P G G P A G G G P GPK A G G
Sbjct: 152 PCPQGPAGAPGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGASGAPGNPGQAGAPGQPGA 211
Query: 631 XXXXXXXXXXXGK-XPXAPPPXTXPPXXXGG 720
G+ P PP P GG
Sbjct: 212 DAQSESIPGAPGQAGPQGPPGPAGSPGAPGG 242
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 28.7 bits (61), Expect = 6.4
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 GPXAXKXXXXFXXXGPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGX 543
GP A G GA G R P P G P P PA G
Sbjct: 193 GPGAPGQAGQDGHPGNAGAPGAPGRVNEVPGP-----AGAPGAPGPDGPAGPA----GSP 243
Query: 544 GXPPXXGPKDAXXPAG--GXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXP 702
G P G + + P G G G P G PPP T P
Sbjct: 244 GAPGNPGSQGSQGPVGDNGAAGAPGQPGGNGNNGADGETGAPGGCDHCPPPRTAP 298
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXP 885
P PP P + P PP PP P P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPP 289
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXG 912
PPPP P P PP P P P G P G
Sbjct: 298 PPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPGMG 331
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPP 855
PPPP P P PP PP
Sbjct: 133 PPPPPPPHYPPPPPHYPP 150
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXP 885
P PP P + P PP PP P P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPP 299
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXG 912
PPPP P P PP P P P G P G
Sbjct: 308 PPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPGMG 341
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXPXXGP 915
P P P P+PP PP P P G P P
Sbjct: 364 PYSPPPIYTSPSPPELPPNPVEAPSITPFTVGLPPSVP 401
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 GPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPA-XXXGGGXGXPPXXGPKDAXX 582
GP G G + HP P G GG P P G G P G
Sbjct: 173 GPAGDAGSPGQPGHPGSPGNPGRGGQRSRGTPGASGRPGPQGPAGAPGQPGRSGGAGTPG 232
Query: 583 PAGGXG 600
P G G
Sbjct: 233 PQGPPG 238
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/69 (34%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = +1
Query: 415 GARGGXXRXXHPPXPFG*GXGG-----GGXXPLPQXRXXPA-XXXGGGXGXPPXXGPKDA 576
G GG PP P G G GG GG PQ GGG G G
Sbjct: 22 GGGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQPGGGYGGAGGFGGAYQ 81
Query: 577 XXPAGGXGG 603
PA G GG
Sbjct: 82 AAPAIGGGG 90
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 26.2 bits (55), Expect(2) = 6.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXP 873
PPP P P+P PPR P
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSP 178
Score = 20.6 bits (41), Expect(2) = 6.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 667 KXPXAPPPXTXPP 705
+ P PPP + PP
Sbjct: 145 RVPRTPPPRSPPP 157
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 GPXAXKXXXXFXXXGPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGX 543
GP A G GA G + P P G P P PA G
Sbjct: 194 GPGAPGQAGQDGHPGNAGAPGAPGKVNEVPGP-----AGAPGAPGPDGPAGPA----GSP 244
Query: 544 GXPPXXGPKDAXXPAG--GXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXP 702
G P G + PAG G G P G PPP T P
Sbjct: 245 GAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPGGCDHCPPPRTAP 299
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 GPXAXKXXXXFXXXGPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGX 543
GP A G GA G + P P G P P PA G
Sbjct: 256 GPGAPGQAGQDGHPGNAGAPGAPGKVNEVPGP-----AGAPGAPGPDGPAGPA----GSP 306
Query: 544 GXPPXXGPKDAXXPAG--GXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXP 702
G P G + PAG G G P G PPP T P
Sbjct: 307 GAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPGGCDHCPPPRTAP 361
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQ 879
PPPP P PP PP P Q
Sbjct: 63 PPPPPPPPPPMCPPPPPPMPSYSPCQ 88
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 GPXAXKXXXXFXXXGPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGX 543
GP A G GA G + P P G P P PA G
Sbjct: 193 GPGAPGQAGQDGHPGNAGAPGAPGKVNEVPGP-----AGAPGAPGPDGPAGPA----GSP 243
Query: 544 GXPPXXGPKDAXXPAG--GXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXP 702
G P G + PAG G G P G PPP T P
Sbjct: 244 GAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPGGCDHCPPPRTAP 298
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 GPXAXKXXXXFXXXGPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGX 543
GP A G GA G + P P G P P PA G
Sbjct: 193 GPGAPGQAGQDGHPGNAGAPGAPGKVNEVPGP-----AGAPGAPGPDGPAGPA----GSP 243
Query: 544 GXPPXXGPKDAXXPAG--GXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXP 702
G P G + PAG G G P G PPP T P
Sbjct: 244 GAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPGGCDHCPPPRTAP 298
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 GPXAXKXXXXFXXXGPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGX 543
GP A G GA G + P P G P P PA G
Sbjct: 194 GPGAPGQAGQDGHPGNAGAPGAPGKVNEVPGP-----AGAPGAPGPDGPAGPA----GSP 244
Query: 544 GXPPXXGPKDAXXPAG--GXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXP 702
G P G + PAG G G P G PPP T P
Sbjct: 245 GAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGEIGAPGGCDHCPPPRTAP 299
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 GPXAXKXXXXFXXXGPGGARGGXXRXXHPPXPFG*GXGGGGXXPLPQXRXXPAXXXGGGX 543
GP A G GA G + P P G P P PA G
Sbjct: 194 GPGAPGQAGQDGHPGNAGAPGAPGKVNEVPGP-----AGAPGAPGPDGPAGPA----GSP 244
Query: 544 GXPPXXGPKDAXXPAG--GXGGXXVXPXXXXXXXXXXXXXXXGKXPXAPPPXTXP 702
G P G + PAG G G P G PPP T P
Sbjct: 245 GAPGNPGSQGPQGPAGDNGGAGSPGQPGANGDNGADGETGAPGGCDHCPPPRTAP 299
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXP 903
PPPP P APP PP P Q G P
Sbjct: 235 PPPPLPPVGAGAPPPPPP--PPPPAQLMASSGTP 266
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXP 903
PPPP P APP PP P Q G P
Sbjct: 221 PPPPLPPVGAGAPPPPPP--PPPPAQLMASSGTP 252
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 802 PPPPXPXTXXPAPPXXPPRXXXXPXQXPXXXGXP 903
PPPP P APP PP P Q G P
Sbjct: 221 PPPPLPPVGAGAPPPPPP--PPPPAQLMASSGTP 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,006,260
Number of Sequences: 27780
Number of extensions: 241690
Number of successful extensions: 2790
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2158
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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