Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_A15
         (921 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA...    30   3.9  
AE014296-1109|AAN12091.1|  417|Drosophila melanogaster CG32401-P...    30   5.1  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   9.0  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   9.0  

>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
            protein.
          Length = 1940

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
 Frame = -2

Query: 707  GRKADRYSGKRQGREQESARGSXPGGN-AWYLYSPVGXXXXXXXXXXX*CSSGGRSLWKN 531
            G  A  YSG   G    S  G+ PG N AW   +  G             + G  S W  
Sbjct: 1811 GSNAGAYSGSNAGAYPGSNAGAYPGSNAAWQSRTNAGSSWHSGPVAGSVSNPGSYSSWST 1870

Query: 530  ASKRG 516
             S  G
Sbjct: 1871 GSSPG 1875


>AE014296-1109|AAN12091.1|  417|Drosophila melanogaster CG32401-PA
           protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -1

Query: 660 GERTRELXRGKRLVSL*SCRVSPPLT*ASIFVMLVRGAEPMEKRQQTRPFYGSWPF 493
           G  T+E+   KRL  L    +        I  ML++ + P     QT PF+ SWPF
Sbjct: 139 GPATKEVQETKRLHFLLFMALIITWFSFLILFMLIKISTPFWIESQTLPFHVSWPF 194


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 306 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 401
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 306 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 401
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,338,310
Number of Sequences: 53049
Number of extensions: 756012
Number of successful extensions: 1874
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)