Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_A12
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 120 4e-28
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 38 0.003
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 35 0.018
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 32 0.13
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 30 0.38
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.51
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 29 1.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 2.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 2.1
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 27 2.7
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 27 2.7
SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces po... 27 3.6
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 3.6
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 27 3.6
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 27 4.7
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 4.7
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 26 6.3
SPAC1B3.10c |||SEL1 repeat protein, unknown biological role|Schi... 26 6.3
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 26 6.3
SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|ch... 26 8.3
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 120 bits (288), Expect = 4e-28
Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Frame = +3
Query: 228 LQPVMH-VLKAKKIVLASASPRRAELIENIGL-KVSLCPSLFEENLVPNEFSKFSDFVEE 401
L+ MH LK K+I+LAS SPRR +L E +G V C S F E+L + + ++ +
Sbjct: 14 LETSMHRQLKDKRIILASGSPRRKQLFEQMGFPNVETCVSGFPEDLNKSMYITPWEYAAD 73
Query: 402 TALHKVLEVEKRLTGMGSAPDIVIGADTMVTLDGEMFGKPTSEAEAFVMLSRL--SGRSH 575
T++ K + V ++L +PDIV+ ADT++ LD E+ KP ML +L S H
Sbjct: 74 TSVQKAIAVYEKLAAEEDSPDIVVSADTILILDSEIMEKPNDPKHHLAMLKKLRNSKTPH 133
Query: 576 TVYTGVVVKTGEEI------VKFT--ESTDVQFG-ELDEQQIRGYIDTGEPMDKAGGYGI 728
V+T V V E+ V T E T V+F + ++ + Y+ GE DKAGGY I
Sbjct: 134 KVFTAVSVIVPMEVPIHPGYVMKTHLEETQVKFDPSITDEFLEAYVRCGEGSDKAGGYAI 193
Query: 729 QGVGGTFVERVEGDYFTVVGLPL 797
QG G +E + GD+ VVGLP+
Sbjct: 194 QGHGALLIESIIGDFSNVVGLPI 216
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 37.5 bits (83), Expect = 0.003
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Frame = -3
Query: 769 SPSTRSTKVXXXXXXXXXPALSIGSPVSMYPLICCSSNSPN*TSVD-SVNFTISSPVFTT 593
+P T ST V AL+ +P++ ++ S+ + T+++ S + T SS + ++
Sbjct: 2926 TPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSS 2985
Query: 592 TPVY--TVCER--PDNLDSITNAS----ASEVGFPNISPSSVTIVSAPITISGAEPIPVK 437
TP+ TV P S+ N+S +S V + +S T+V++ I+ + +
Sbjct: 2986 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 3045
Query: 436 RFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALASTIFL 257
TS T+ + + S ++LNS T +S+ + T +P+ S S A+ S+ +
Sbjct: 3046 TPITSSTVLNSSTPITSSSVLNS-STPITSSTALN--TSTPITSSSVLNSSTAITSSSIV 3102
Query: 256 AFKTCITGCNIFVSRASPIYLTSKIELNKELE*TSN 149
T IT ++ S + +TS LN TS+
Sbjct: 3103 NSSTPITSSSVLNSSTA---ITSSSILNSSTPITSS 3135
Score = 37.1 bits (82), Expect = 0.003
Identities = 55/222 (24%), Positives = 96/222 (43%)
Frame = -3
Query: 769 SPSTRSTKVXXXXXXXXXPALSIGSPVSMYPLICCSSNSPN*TSVDSVNFTISSPVFTTT 590
+P T ST + L+ +P++ ++ S+ + + ++S SS V T+
Sbjct: 2302 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 2361
Query: 589 PVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVKRFSTSRTL* 410
T + SIT++S P I+ S+V S PIT S + TS T+
Sbjct: 2362 TPITSSTALNTSTSITSSSVLNSSTP-ITSSTVVNTSTPITSSSV--LNSSTPITSSTVV 2418
Query: 409 RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALASTIFLAFKTCITGC 230
+S S ++LNS T +S++ + T P+ S + + S+ L T IT
Sbjct: 2419 NTSTSITSSSVLNS-STPITSSSVLNSST--PITSSTVVNSSTPITSSSVLNSSTPITS- 2474
Query: 229 NIFVSRASPIYLTSKIELNKELE*TSNVDNLDSTLXTKFSLL 104
+ ++ ++PI TS LN TS+ ST T +++
Sbjct: 2475 STALNTSTPI--TSSSVLNSSTPITSSTVVNTSTPITSSTVV 2514
Score = 34.7 bits (76), Expect = 0.018
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Frame = -3
Query: 769 SPSTRSTKVXXXXXXXXXPALSIGSPVSMYPLICCSSNSPN*TSVD-SVNFTISSPVFTT 593
+P T S+ + AL+ +P++ ++ S+ + T+++ S T SS + ++
Sbjct: 694 TPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSS 753
Query: 592 TPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVKRFSTSRTL 413
TP+ T ++ IT++S P I+ S+V S PIT S + TS T+
Sbjct: 754 TPI-TSSSILNSSTPITSSSVLNSSTP-ITSSTVVNTSTPITSSSV--LNSSTPITSSTV 809
Query: 412 *RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALASTIFLAFKTCITG 233
+ + S ++LNS T +S+ + T +P+ S + + S+ L T IT
Sbjct: 810 LNSSTPITSSSVLNS-STPITSSTVVN--TSTPITSSTVVNSSTPITSSSVLNSSTPITS 866
Query: 232 CNIFVSRASPIYLTSKIELNKELE*TSNVDNLDSTLXTKFSLL 104
+ ++ ++PI TS LN TS+ ST T +++
Sbjct: 867 -STALNTSTPI--TSSSVLNSSTPITSSTVVNTSTPITSSTVV 906
Score = 34.7 bits (76), Expect = 0.018
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 9/231 (3%)
Frame = -3
Query: 769 SPSTRSTKVXXXXXXXXXPALSIGSPVSMYPLICCSSNSPN*TSVD-SVNFTISSPVFTT 593
+P T ST V AL+ P++ ++ S+ + T+++ S + T SS + ++
Sbjct: 1258 TPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSS 1317
Query: 592 TPVY--TVCER--PDNLDSITNAS----ASEVGFPNISPSSVTIVSAPITISGAEPIPVK 437
TP+ TV P S+ N+S +S V + +S T+V+ I+ + +
Sbjct: 1318 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTS 1377
Query: 436 RFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALASTIFL 257
TS T+ + + S +LNS T +S++ + T P+ S + + S+ +
Sbjct: 1378 TPITSSTVVNSSTPITSSTVLNS-STPITSSSVLNSST--PITSSTVVNTSTPITSSTVV 1434
Query: 256 AFKTCITGCNIFVSRASPIYLTSKIELNKELE*TSNVDNLDSTLXTKFSLL 104
T IT + V+ ++PI TS LN TS+ ST T +++
Sbjct: 1435 NSSTPITSSTV-VNTSTPI--TSSSVLNSSTPITSSTVVNTSTPITSSTVV 1482
Score = 33.5 bits (73), Expect = 0.041
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 1/223 (0%)
Frame = -3
Query: 769 SPSTRSTKVXXXXXXXXXPALSIGSPVSMYPLICCSSNSPN*TSVDSVN-FTISSPVFTT 593
+P T S+ + L+ +P++ ++ S+ + + ++S T S+ + T+
Sbjct: 2110 TPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTS 2169
Query: 592 TPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVKRFSTSRTL 413
TP+ T ++ IT+++ P I+ S+V S PIT S + TS T+
Sbjct: 2170 TPI-TSSSVLNSSTPITSSTVVNSSTP-ITSSTVVNTSTPITSSTV--VNTSTPITSSTV 2225
Query: 412 *RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALASTIFLAFKTCITG 233
+ + S +LNS T +S++ + T P+ S + + S+ + T IT
Sbjct: 2226 VNSSTPITSSTVLNS-STPITSSSVLNSST--PITSSTVVNTSTPITSSTVVNSSTPITS 2282
Query: 232 CNIFVSRASPIYLTSKIELNKELE*TSNVDNLDSTLXTKFSLL 104
+ V+ ++PI TS +N TS+ ST T S+L
Sbjct: 2283 STV-VNTSTPI--TSSTVVNSSTPITSSTALNTSTPITSSSVL 2322
Score = 32.3 bits (70), Expect = 0.095
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Frame = -3
Query: 613 SSPVFTTTPVYTVCERPDNLDS-ITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVK 437
S P TT + P+N + IT+ +A P I+ SSV S PIT S +
Sbjct: 349 SKPTDTTNSISFANTTPENTSTQITSPTAVNSSTP-ITSSSVLNSSTPITSSSI--LNTS 405
Query: 436 RFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALASTIFL 257
TS ++ + + S ++LNS T +S+ + T P+ S ++ + S+ L
Sbjct: 406 TPITSSSVLNSSTPITSSSILNS-STPITSSTVLNSST--PITSSTALNTSTPITSSSVL 462
Query: 256 AFKTCITGCNIFVSRASPIYLTSKIELNKELE*TSNVDNLDSTLXTKFSLL 104
T IT ++ ++ ++PI TS +N TS+ ST T + L
Sbjct: 463 NSSTPITSSSV-LNSSTPI--TSSTVVNTSTPITSSTVVNSSTPITSSTAL 510
Score = 31.1 bits (67), Expect = 0.22
Identities = 43/156 (27%), Positives = 72/156 (46%)
Frame = -3
Query: 631 SVNFTISSPVFTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 452
S T S+ V ++TP+ T + IT++S P I+ S+V S PIT S A
Sbjct: 3369 STPITSSTVVNSSTPI-TSSTALNTSTPITSSSVLNSSTP-ITSSTVVNSSTPITSSTA- 3425
Query: 451 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALA 272
+ TS T+ + + S ++LNS T +S++ + T P+ S S ++
Sbjct: 3426 -LNTSTPITSSTVVNSSTPITSSSVLNS-STAIASSSILNSST--PITSSSVLNSSTPIS 3481
Query: 271 STIFLAFKTCITGCNIFVSRASPIYLTSKIELNKEL 164
S+ + + + G + +S AS I S + LN L
Sbjct: 3482 SSTVIT-SSVVIGSSSVLSYASSI--VSSVSLNSSL 3514
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 34.7 bits (76), Expect = 0.018
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Frame = -3
Query: 712 ALSIGSPVSMYPLICCSSNSPN*TSVDSVNFTISSPVFTTTPVYTVCERPDNLDSITNAS 533
++S G+ + L +S++ + +++ + + SS FTTT L S +S
Sbjct: 177 SVSTGTSTDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISS 236
Query: 532 ASEVGFPNISPSSVTIVSAPITISGAEPIP-VKRFSTSRTL*RAVSSTKSENLLNS-FGT 359
AS + S +T S P+T+S + +ST+ T + ++T S + +S F +
Sbjct: 237 ASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSSPFYS 296
Query: 358 KFSSNNDGHKLTLSPMFSISSARRGDALASTIFLAFKTCITGCNIFVSRASPIYLTSKI 182
S ++S S SS+ AS + + TG F S + P Y S +
Sbjct: 297 NSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGSATFTS-SPPFYSNSSV 354
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -3
Query: 664 SSNSPN*TSVDSVNFTISSPVFTTTPVYTVC-ERPDNLDSITNASASEVGFPNISPSSVT 488
SS++ T+ V +T S TTT T C RP+ S T ++ S V S +S+T
Sbjct: 549 SSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETIS-TVSTTSTVSESGSSSASIT 607
Query: 487 IVSAPITIS 461
T+S
Sbjct: 608 STYPSSTLS 616
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.9 bits (69), Expect = 0.13
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Frame = -3
Query: 637 VDSVNFTISSPVFTTTPVYTVCERPDNLDSIT-NASASEVGFPNISPSSVTIVSAPITIS 461
V S T++ P T TV ++ T + ++S V P+ S S S PI+ S
Sbjct: 429 VSSYVSTVTQPASTRVQTTTVSSISTSVKQPTASVASSSVSVPS-SSSVQPQSSTPISSS 487
Query: 460 GAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGD 281
+ P STS + VSST +S SS+ + SPM S+ S+
Sbjct: 488 SSASSPQSTLSTSSEVVSEVSSTLLSG--SSAIPSTSSSTPSSSIISSPMTSVLSS--SS 543
Query: 280 ALASTIFLAFKTCITGCNIFVSRAS 206
++ ++ F + IT + +S +S
Sbjct: 544 SIPTSSSSDFSSSITTISSGISSSS 568
Score = 26.2 bits (55), Expect = 6.3
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Frame = -3
Query: 769 SPSTRSTKVXXXXXXXXXPALSIGSPVSMYPLICCSS---NSPN*TSVDSVNFTISSPVF 599
SPS+ S + + S SP S+ I SS +SP S S+ + SS +
Sbjct: 586 SPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPT-PSTSSLMISSSSIIS 644
Query: 598 TTTPVYTVCERPDNLDSITNASASEVGFPNISP-----SSVTIVSAPITISGAEPIPVKR 434
++ + + + S + +S V P+ S SS+ + S+P+ S + PIP
Sbjct: 645 GSSSILSSSISTIPISSSLSTYSSSV-IPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSS 703
Query: 433 --FST-SRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFS-ISSARRGDALAST 266
ST S +L S+ S ++S +S N +T S + +SS A+ S+
Sbjct: 704 SLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSAIVSS 763
Score = 26.2 bits (55), Expect = 6.3
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Frame = -3
Query: 712 ALSIGSPVSMYPLICCSSNSPN*TSVDSVNFTISSPVFTTTPVYTVCERPDNLDSITNAS 533
A++ S+ P S++S + +S + S+ +T+ + T + S+ AS
Sbjct: 936 AITSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIATASVSGSSTSSVATAS 995
Query: 532 ASEVGFPNISPSSVT------IVSAPITISGAEPIPVKRFSTSRTL*RAVSSTKSENLLN 371
A++ +I+ +SVT + +A +T S + + S T AV+S + +
Sbjct: 996 ATDSSTSSIAAASVTGSSTSSVATASVTDSSTSSVATASATDSSTSSIAVASVTGSSTSS 1055
Query: 370 SFGTKFSSNNDGHKLTLSPMFSISSA 293
+ ++ T S S+SS+
Sbjct: 1056 VATASATDSSTSSVATASITGSLSSS 1081
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 30.3 bits (65), Expect = 0.38
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +3
Query: 252 KAKKIVLASASPRRAELIENIGLKVSLCPSLFEENLVPNEFSKFSDFVEETALHKVLEVE 431
K K S P E++ + L + PSL LV F+ FS+ + ++H + +V
Sbjct: 602 KKSKRESTSNEPTAMEILTEVMLSLLSRPSLLLRKLVDMLFTSFSEDMNRESIHLICDVL 661
Query: 432 KRLTGMGSAPDIVIGADTMVTLDGE 506
K + + + G + GE
Sbjct: 662 KAKESVKDSEGMFAGEEVEEDAFGE 686
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.9 bits (64), Expect = 0.51
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Frame = -3
Query: 664 SSNSPN*TSVDSVNFTISSPVFTTTPVYTVCERPDNLDSITNASASEVG----FPNISPS 497
SS+ + TS + + +ISS V ++TP+ + + +S+++ P+ +PS
Sbjct: 229 SSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPS 288
Query: 496 SVTIVSA-PITISGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTL 320
S + SA T + A P+ +++ T + + S + NS +S+ +
Sbjct: 289 STPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNS 348
Query: 319 SPMFSISSARRGDALASTIFLAFKTCITGCN-IFVSRASPIYLTS 188
+ S SS ++T A T +T N + AS LTS
Sbjct: 349 TTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTS 393
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -3
Query: 418 TL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSIS 299
T+ + VSS++ ++++S G+ +N G K++ SP+ +S
Sbjct: 410 TIEKGVSSSELSSIVSSTGSIVETNGIGEKMSFSPLKKLS 449
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 2.1
Identities = 34/127 (26%), Positives = 62/127 (48%)
Frame = -3
Query: 673 ICCSSNSPN*TSVDSVNFTISSPVFTTTPVYTVCERPDNLDSITNASASEVGFPNISPSS 494
+ SS+SP+ +S ++ SS + T++ T S++++S+S + S SS
Sbjct: 215 VVSSSSSPSSSSSSTLT---SSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTA--SSSSSS 269
Query: 493 VTIVSAPITISGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSP 314
+I+S+ + S + P STS T+ + SS+ S +S + SS++ TLS
Sbjct: 270 SSIISSSSS-SSSSPT-----STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSS 323
Query: 313 MFSISSA 293
SS+
Sbjct: 324 SSMSSSS 330
Score = 27.5 bits (58), Expect = 2.7
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -3
Query: 664 SSNSPN*TSVDSVNFTISSPVFTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTI 485
SS+S TS +I S +++ + + + +++S+S + S SS +
Sbjct: 224 SSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSP 283
Query: 484 VSAPITISGAEPIPVKRFSTSRTL*RAVSSTK--SENLLNSFGTKFSSNNDGHKLTLSPM 311
S TIS + STS T+ + SS+ S L +S + SS + + S +
Sbjct: 284 TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTI 343
Query: 310 FSISSARRGDALAST 266
S SS+ + +ST
Sbjct: 344 SSSSSSPSSSSFSST 358
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/117 (20%), Positives = 49/117 (41%)
Frame = -3
Query: 643 TSVDSVNFTISSPVFTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITI 464
TS+ + +S FT++ + S + AS S + N++ SS T+ + P T
Sbjct: 637 TSIPLTSTNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVSTPPPTT 696
Query: 463 SGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSA 293
S ++S +ST+ + S GT+ + + + S ++ +S+
Sbjct: 697 SFPSTFTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPASS 753
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 673 ICCSSNSPN*TSVDSVNFTIS-SPVFTTTPVYTVCERPDNLDSITNASASEVGFPNISPS 497
I SS++P SV + + +S S + TT+PV T P + ++N++ + S
Sbjct: 91 ISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILSNSTIPSSSSISASTI 150
Query: 496 SVTIVS 479
+ TI+S
Sbjct: 151 TTTIIS 156
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = -3
Query: 832 LCIL*STEHSLYXGRPTTVK*SPSTRSTKVXXXXXXXXXPAL-SIGSPVSMYPLICCSSN 656
+C L + HSL+ +K S S +V P+ S+ ++P + +
Sbjct: 68 ICSLRARLHSLHGPSTVFLKRETSQISARVNDENGFTASPSFFSVDCFDELFPTLSTTDE 127
Query: 655 SPN*TSVDSVNFTISSPVFTTTPVYTVCERPDN 557
P S+ S++ + S P + P ++ + PDN
Sbjct: 128 QPKEPSIISISSSSSDPSSSPPPSSSLLKTPDN 160
>SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 213
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -3
Query: 583 YTVCERPDNLDSITNASASEVGFPNISPS--SVTIVSAPI 470
Y+ C RPD + I + VG P+I P + S+P+
Sbjct: 27 YSACNRPDKISGIAKEAMEHVG-PSIYPKLREALVKSSPL 65
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -3
Query: 613 SSPVFTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVKR 434
+SPV T TP + RP ++ ++++ S+ S V I+S P+ S A P
Sbjct: 315 NSPVDTHTPSTPIMSRPPSMKALSSGVESQDESVASSNFQVPIISNPLFKSPAPYSPTSV 374
Query: 433 FS 428
S
Sbjct: 375 IS 376
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 463 SGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKL 326
+G EP +T + + S E L+NS+GT S N G +L
Sbjct: 73 AGNEPKSQNSSTTRGSAKKQSSKGLEEKLINSYGTHVESLNKGRRL 118
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 456 QSPFLSNAFLPPELCEGLSPQ 394
QSPF +N F PP + EG P+
Sbjct: 283 QSPFQNNWFPPPTIPEGWEPK 303
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 465 YLEQSPFLSNAFLPPEL 415
Y QSPF SN+F P EL
Sbjct: 38 YANQSPFSSNSFSPTEL 54
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 6.3
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = -3
Query: 664 SSNSPN*TSVDSVNFTISSPVFTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTI 485
S++S T S + SS ++TP+ + SI+++++S V + S SS +I
Sbjct: 141 STSSSTATPSSSSTTSSSSSSSSSTPISSSIT-----SSISSSASSSVSSSSAS-SSGSI 194
Query: 484 VSAPI-TISGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFS 350
SA T+S + + FSTS T + SS+ + N +S T +S
Sbjct: 195 SSADAKTVSASSNSTISGFSTSTT---SASSSAAGNSSSSSYTSYS 237
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -3
Query: 598 TTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPV 440
TTTP + D + T+A AS G N P + +AP S I V
Sbjct: 597 TTTPTPRTAAQEDPAEETTDALASAEGENNQMPQVLETEAAPSIASEGRSITV 649
>SPAC1B3.10c |||SEL1 repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 680
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 770 ISFNSLHKGSSNALDAITSSFIHRLSRINV-PSDLLFI*FTKLNISRLSEFYNLFSRLHN 594
+ + + H +SN +D + L+ +N P L+F+ +L +R E Y+LF R
Sbjct: 379 LGYMAYHGLTSNGVDREKGMRLINLAVMNENPHALMFLGLIRLEEARYEEAYHLFLRAAT 438
Query: 593 HSCVHS 576
V S
Sbjct: 439 QKSVIS 444
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 556 LDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVKRFS 428
L++ N S S++ PS+V +S P SGA +KR S
Sbjct: 55 LNTTPNESTSQIDSSPKIPSAVPHISTPNPSSGASTPNIKRVS 97
>SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 604 VFTTTPVYTVCERPDNLDSITNASASEVGFPNI 506
V TT+P + + DNLD +TNA S+ F N+
Sbjct: 105 VITTSPPFGHIK--DNLDIVTNAYFSQGDFSNL 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,241,850
Number of Sequences: 5004
Number of extensions: 65055
Number of successful extensions: 221
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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