Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_A10
(898 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001747-1|AAN71502.1| 421|Drosophila melanogaster RE74585p pro... 35 0.17
AE014297-123|AAN13285.1| 421|Drosophila melanogaster CG9775-PC,... 35 0.17
AE014297-122|AAF52112.1| 421|Drosophila melanogaster CG9775-PA,... 35 0.17
AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p pro... 32 0.93
AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA ... 32 0.93
AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p pro... 29 6.5
AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding ... 29 6.5
AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protei... 29 6.5
AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC... 29 6.5
AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB... 29 6.5
AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA... 29 6.5
>BT001747-1|AAN71502.1| 421|Drosophila melanogaster RE74585p
protein.
Length = 421
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 574 GQQSGRVTRVAQRGRPATR-PTGRVLRSQQQKPVPSREQLDAELDQYMA 717
G +SG +V +RGR +R PTG+ Q+P RE LD ELDQYM+
Sbjct: 368 GVKSGPQQQV-RRGRSRSRKPTGK-----PQRPEVKREDLDMELDQYMS 410
>AE014297-123|AAN13285.1| 421|Drosophila melanogaster CG9775-PC,
isoform C protein.
Length = 421
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 574 GQQSGRVTRVAQRGRPATR-PTGRVLRSQQQKPVPSREQLDAELDQYMA 717
G +SG +V +RGR +R PTG+ Q+P RE LD ELDQYM+
Sbjct: 368 GVKSGPQQQV-RRGRSRSRKPTGK-----PQRPEVKREDLDMELDQYMS 410
>AE014297-122|AAF52112.1| 421|Drosophila melanogaster CG9775-PA,
isoform A protein.
Length = 421
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 574 GQQSGRVTRVAQRGRPATR-PTGRVLRSQQQKPVPSREQLDAELDQYMA 717
G +SG +V +RGR +R PTG+ Q+P RE LD ELDQYM+
Sbjct: 368 GVKSGPQQQV-RRGRSRSRKPTGK-----PQRPEVKREDLDMELDQYMS 410
>AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p
protein.
Length = 266
Score = 32.3 bits (70), Expect = 0.93
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 565 RGAGQQSGRVTRVAQRGRPATRPTGRVLRSQQQKPVPSREQLDAELDQYM 714
RG GQ G R +R +P R +++ P P+ E+LDAELD Y+
Sbjct: 214 RGGGQAGGTARRGFKRP-VGGKPAAGGQRRERKAP-PTAEELDAELDSYI 261
>AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA
protein.
Length = 266
Score = 32.3 bits (70), Expect = 0.93
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 565 RGAGQQSGRVTRVAQRGRPATRPTGRVLRSQQQKPVPSREQLDAELDQYM 714
RG GQ G R +R +P R +++ P P+ E+LDAELD Y+
Sbjct: 214 RGGGQAGGTARRGFKRP-VGGKPAAGGQRRERKAP-PTAEELDAELDSYI 261
>AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p
protein.
Length = 999
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 644 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 733
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding
protein Smaug protein.
Length = 999
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 644 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 733
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protein
protein.
Length = 999
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 644 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 733
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC,
isoform C protein.
Length = 999
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 644 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 733
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB,
isoform B protein.
Length = 999
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 644 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 733
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA,
isoform A protein.
Length = 999
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 644 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 733
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,755,064
Number of Sequences: 53049
Number of extensions: 717646
Number of successful extensions: 2204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2202
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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