Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_P18
(1098 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 80 3e-15
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 78 1e-14
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 73 4e-13
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 73 4e-13
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 71 2e-12
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 44 3e-04
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 43 4e-04
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 39 0.007
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 39 0.007
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 32 0.83
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 79.8 bits (188), Expect = 3e-15
Identities = 39/81 (48%), Positives = 49/81 (60%)
Frame = +2
Query: 335 AXXNXLGMNPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHT 514
A N + MNP+NT+FDAK LIGRKF+D VQ+DMKHW F+ + +
Sbjct: 54 AAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENK 113
Query: 515 TFIPEEVRSMVLTKMKETGRS 577
F PEE+ SMVL KMKET +
Sbjct: 114 IFTPEEISSMVLLKMKETAEA 134
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VGVF HGK EIIANDQ +
Sbjct: 12 GTTYSCVGVFMHGKVEIIANDQGNR 36
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 277 NRTXPTYVAYRDTEXXIG 330
NRT P+YVA+ DTE IG
Sbjct: 35 NRTTPSYVAFTDTERLIG 52
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 78.2 bits (184), Expect = 1e-14
Identities = 38/81 (46%), Positives = 49/81 (60%)
Frame = +2
Query: 335 AXXNXLGMNPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHT 514
A N + MNP+NT+FDAK LIGRKF+D VQ+DMKHW F+ + +
Sbjct: 54 AAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENK 113
Query: 515 TFIPEEVRSMVLTKMKETGRS 577
F PEE+ SMVL KMK+T +
Sbjct: 114 IFTPEEISSMVLLKMKKTAEA 134
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VGVF HGK EIIANDQ +
Sbjct: 12 GTTYSCVGVFMHGKVEIIANDQGNR 36
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 277 NRTXPTYVAYRDTEXXIG 330
NRT P+YVA+ DTE IG
Sbjct: 35 NRTTPSYVAFTDTERLIG 52
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 72.9 bits (171), Expect = 4e-13
Identities = 41/83 (49%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 335 AXXNXLGMNPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRV--X 508
A N L +NP NTIFDAK LIGR + D TVQAD+KHW F+ S ++V
Sbjct: 85 AAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVID---KSNKPSVEVKVGSD 141
Query: 509 HTTFIPEEVRSMVLTKMKETGRS 577
+ F PEEV +MVL KMKE S
Sbjct: 142 NKQFTPEEVSAMVLVKMKEIAES 164
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VGV+++G+ EIIANDQ +
Sbjct: 41 GTTYSCVGVYKNGRVEIIANDQGNR 65
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 72.9 bits (171), Expect = 4e-13
Identities = 41/83 (49%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 335 AXXNXLGMNPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRV--X 508
A N L +NP NTIFDAK LIGR + D TVQAD+KHW F+ S ++V
Sbjct: 85 AAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVID---KSNKPSVEVKVGSD 141
Query: 509 HTTFIPEEVRSMVLTKMKETGRS 577
+ F PEEV +MVL KMKE S
Sbjct: 142 NKQFTPEEVSAMVLVKMKEIAES 164
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VGV+++G+ EIIANDQ +
Sbjct: 41 GTTYSCVGVYKNGRVEIIANDQGNR 65
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 70.5 bits (165), Expect = 2e-12
Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 335 AXXNXLGMNPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHT 514
A N L +NP NTIFDAK LIGR + + TVQ D+KHW F+ S ++V
Sbjct: 82 AAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVD---KSNKPNVEVKVGSE 138
Query: 515 T--FIPEEVRSMVLTKMKETGRS 577
T F PEEV +MVLTKMK+ S
Sbjct: 139 TKQFTPEEVSAMVLTKMKQIAES 161
Score = 35.9 bits (79), Expect = 0.051
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VGVF++G+ EIIANDQ +
Sbjct: 38 GTTYSCVGVFKNGRVEIIANDQGNR 62
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +2
Query: 359 NPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHTTFIPEEVR 538
NP NT+FDAK LIGR+F+++TVQ+D KHW F G + + ++ F PEE+
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKHWPF-GVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 539 SMVLTKMKETGRS 577
+MVL KMKET +
Sbjct: 121 AMVLQKMKETAET 133
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VG++Q+GK EI+AN + +
Sbjct: 12 GTTYSCVGIYQNGKVEILANSEGNK 36
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 277 NRTXPTYVAYRDTEXXIGACRQXPXGDEPQ 366
N+T P+YVA+ DTE +G + P+
Sbjct: 35 NKTTPSYVAFTDTERLVGDAAKDQAARNPE 64
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +2
Query: 359 NPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHTTFIPEEVR 538
NP NT+FDAK LIGR+F+++TVQ+D KHW F G + + ++ F PEE+
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKHWPF-GVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 539 SMVLTKMKETGRS 577
+MVL KMKET +
Sbjct: 121 AMVLQKMKETAET 133
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VG++Q+GK EI+AN + +
Sbjct: 12 GTTYSCVGIYQNGKVEILANSEGNK 36
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 277 NRTXPTYVAYRDTEXXIGACRQXPXGDEPQ 366
N+T P+YVA+ DTE +G + P+
Sbjct: 35 NKTTPSYVAFTDTERLVGDAAKDQAARNPE 64
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 64.5 bits (150), Expect = 1e-10
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +2
Query: 359 NPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHTTFIPEEVR 538
NP NT+FDAK LIGR+F++ TVQ+D+KHW F + + ++ F EE+
Sbjct: 62 NPENTVFDAKRLIGRRFDEETVQSDIKHWPFT-VKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 539 SMVLTKMKETGRSL 580
+MVL KMKET ++
Sbjct: 121 AMVLQKMKETAEAV 134
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 207 GSTYXXVGVFQHGKGEIIANDQSQQ 281
G+TY VG++Q+GK EI+AN + +
Sbjct: 12 GTTYSCVGIYQNGKVEILANSEGNK 36
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 277 NRTXPTYVAYRDTEXXIGACRQXPXGDEPQ 366
N+T P+YVA+ DTE +G + P+
Sbjct: 35 NKTTPSYVAFTDTERLVGDAAKDQAARNPE 64
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 359 NPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHTTFIPEEVR 538
N NT+F K LIGR++ED VQ D+K ++ + S G + + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV---KASNGDAW-VEAQGKVYSPSQVG 145
Query: 539 SMVLTKMKETGRS 577
+ VL KMKET S
Sbjct: 146 AFVLMKMKETAES 158
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 359 NPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHTTFIPEEVR 538
N NT+F K LIGR++ED VQ D+K ++ + S G + + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV---KASNGDAW-VEAQGKEYPPSQVG 145
Query: 539 SMVLTKMKETGRS 577
+ VL KMKET S
Sbjct: 146 AFVLMKMKETAES 158
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 278 TGPXRLMLRTETPXVSSEHAXXNXLGMNPNNTIFDAKXLIGRKFEDATVQADMKHWXFR 454
T P L + + + +HA + +G N++FD K +IGR+++D +Q DM W F+
Sbjct: 33 TTPSVLAVGEDGDLLIGQHAK-DVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFK 89
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 278 TGPXRLMLRTETPXVSSEHAXXNXLGMNPNNTIFDAKXLIGRKFEDATVQADMKHWXFR 454
T P L + + + +HA + +G N++FD K +IGR+++D +Q DM W F+
Sbjct: 33 TTPSVLAVGEDGDLLIGQHAK-DVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFK 89
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 33.5 bits (73), Expect = 0.27
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 359 NPNNTIFDAKXLIGRKFEDATVQADMKHWXFRGCQ*WRXS*GSXXHIRVXHTTFIPEEVR 538
N NT+ + K LIGRKF D Q + + + G TF PE+V
Sbjct: 59 NIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVL 118
Query: 539 SMVLTKMKETGRSLCSXI-TVAXC 607
+ +LTK++ S S + V+ C
Sbjct: 119 AALLTKLRTIVESQLSDVKKVSDC 142
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 31.9 bits (69), Expect = 0.83
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 359 NPNNTIFDAKXLIGRKFE--DATVQADMKHWXFR 454
NP TI+DAK IGR FE + +D K + F+
Sbjct: 94 NPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFK 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,925,304
Number of Sequences: 27780
Number of extensions: 198388
Number of successful extensions: 297
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2960813354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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