Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_P16
         (1130 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861     29   5.1  
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    29   9.0  

>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
          Length = 158

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 586 KXXKGGXXREGXXXKXXXXXXGXKKEKKXKKXXGXGRRKKKXXXKRRXRKR 738
           K  +GG  R     K      G +K  +  +  G GRRK++   +RR R+R
Sbjct: 81  KRRRGGGRRAAGRRKEEEEA-GRRKAGEETRRRGAGRRKRRRGGRRRRRRR 130


>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 655 KKEKKXKKXXGXGRRKKKXXXKRRXRKRXXXXXXXEXKKK 774
           KK+KK KK     ++KKK   K++ +K+       + KK+
Sbjct: 69  KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.303    0.130    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,320,663
Number of Sequences: 37544
Number of extensions: 49594
Number of successful extensions: 120
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3421418428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)