Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_P11
         (916 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   7.4  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    24   7.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.8  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 13/72 (18%), Positives = 35/72 (48%)
 Frame = +1

Query: 418 Q*KRSWSSNQRRI*TESRKWRISYYYSR*RQETKERKSEKEVVAQVYQLQQER*AQTRKE 597
           Q ++     Q++   + R+W+      + +Q  ++++   +   Q +Q QQ++  Q R++
Sbjct: 241 QQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQ 300

Query: 598 AKGRGD*DKW*T 633
            + +   + W T
Sbjct: 301 QQQQEQQELWTT 312


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +2

Query: 452 ESEQKAENGESVTTTPD 502
           +++Q+AE+GE+V  TP+
Sbjct: 24  KTDQEAEHGETVPATPE 40


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = +2

Query: 293 LKPQINGDAHIHEQTAKE-KELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKA 469
           L+ Q   +    EQ  KE +E +    +  +    E+E  E   E+EA      E E++ 
Sbjct: 474 LREQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERERERER 533

Query: 470 ENGESVTTTP 499
           E    +   P
Sbjct: 534 ERERMMHMMP 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,970
Number of Sequences: 2352
Number of extensions: 11567
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)