Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_P11
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 34 0.12
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.22
U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical p... 32 0.50
U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical p... 32 0.50
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 32 0.50
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 32 0.50
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 31 0.87
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 31 0.87
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 31 0.87
Z80344-1|CAB02485.1| 183|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 31 1.5
AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical ... 31 1.5
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 30 2.0
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 30 2.0
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 30 2.0
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 30 2.7
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 30 2.7
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 30 2.7
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 29 4.6
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 29 4.6
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 29 4.6
AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical... 29 4.6
Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical pr... 29 6.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 6.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 6.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 6.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 6.1
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 8.1
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 8.1
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 28 8.1
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 28 8.1
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 28 8.1
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 28 8.1
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 332 QTAKEKELDSGTPEN-EKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVTTT 496
+ A++++ +G P N +KD EKE IE EKE V ++ +E E TT
Sbjct: 708 RNAEKRKSGAGLPTNSDKDEVIEKEEIEKETEKEKKKVIRRRVKKVSEPSEEEVTT 763
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 350 ELDSGTP--ENEKDATTEKEAIENSNEKEAGPV-TNGESEQKAENGESVTTTPDD 505
E +SGT NE+ TTE + + + KEA + + +S+ + GES TTT D
Sbjct: 194 ESESGTTVSNNEETTTTENKVADEAPSKEAESIQASQDSDHVEKEGESETTTTSD 248
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.22
Identities = 37/152 (24%), Positives = 57/152 (37%)
Frame = +2
Query: 284 VDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQ 463
+D ++PQ++GD E AK+ +LDS + + KE E+E N S
Sbjct: 40 LDQMEPQVSGDDESLEM-AKKVKLDSAQTSSFSSQSKMKE--PEVPEREPSTPNNSRSNW 96
Query: 464 KAENGESVTTTPDDGXXXXXXXXXXXWSLRSISFSRKDKPXXXXXXXXXXXXXNGEPEKV 643
+++ E +T D + +S GE E+
Sbjct: 97 RSDMDEELTDDEDTPTP----------EVIDVSSDESMADVMEEINQEVEEEEEGEAEEG 146
Query: 644 PEEVIEAXAEQSQNETVEEVKTPSEANEDKTP 739
EEV+E E E VEE+K E + TP
Sbjct: 147 QEEVVEEVEE--DEEEVEEIKEKVEEVREVTP 176
>U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical
protein C10G8.8b protein.
Length = 295
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 448
E+L + + +++ + H E+ +++ ++ TP+N + A E+ E S +KE T
Sbjct: 202 EELEEEPKSEDEVDVEDHDQEE-CQDQRTETQTPKNSEPAQEEETRAEESKDKEN---TE 257
Query: 449 GESEQKAENGESV 487
E K E+ E V
Sbjct: 258 NSDETKEESSEDV 270
>U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical
protein C10G8.8a protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 448
E+L + + +++ + H E+ +++ ++ TP+N + A E+ E S +KE T
Sbjct: 292 EELEEEPKSEDEVDVEDHDQEE-CQDQRTETQTPKNSEPAQEEETRAEESKDKEN---TE 347
Query: 449 GESEQKAENGESV 487
E K E+ E V
Sbjct: 348 NSDETKEESSEDV 360
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 448
E+ D + K + A + + A++KE + G+P+ + +K I+ S K++ T+
Sbjct: 165 EEQDDTEEKKENEDASAEVVIENAEDKEEEEGSPKKKGQKRCQKSPIQ-SEAKKSKSETD 223
Query: 449 GESEQKAENG-ESVTTTPDD 505
E+ + +G + V T +D
Sbjct: 224 AETAPSSSSGVDGVATEEED 243
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 448
E+ D + K + A + + A++KE + G+P+ + +K I+ S K++ T+
Sbjct: 187 EEQDDTEEKKENEDASAEVVIENAEDKEEEEGSPKKKGQKRCQKSPIQ-SEAKKSKSETD 245
Query: 449 GESEQKAENG-ESVTTTPDD 505
E+ + +G + V T +D
Sbjct: 246 AETAPSSSSGVDGVATEEED 265
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 308 NGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAENGES 484
+ D H +E + + + G+ NE++ T K + NE+ +N EQ+ EN ++
Sbjct: 22 SNDEHSNESSTRSSKSRDGSHHNEEEGETSKASDPQINEESEDETSNASDEQE-ENDDT 79
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +2
Query: 344 EKELDSGTPENEKDATTEKEAIE----NSNEKEAGPVTNGESEQKAEN-GESVTTTPDD 505
+ ++DSG PE+ +D +K+ E +++ + + + EN GE V+TTP++
Sbjct: 169 QPDMDSGEPESAEDGIDKKKTAEKVDFTTDDNNVSQEADAKPDSTHENGGEHVSTTPEE 227
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily assigned
gene nameprotein 158 protein.
Length = 1003
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 329 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVT 490
E+ A K+ D GTP E + TTEK++ NE+ + KA + V+
Sbjct: 881 ERRANSKDSDEGTP-TESEETTEKKSTSTDNEQANQETKTKKERMKALDRSKVS 933
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 329 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVTTTPDD 505
++ KEKE + +NE D EKEA E EKE P E++ E T T D+
Sbjct: 72 KEKEKEKEKEKTHEKNEADKE-EKEA-EKEEEKEEKPPKEVTEEKEKEKEREKTKTKDE 128
>Z80344-1|CAB02485.1| 183|Caenorhabditis elegans Hypothetical
protein F15D4.2 protein.
Length = 183
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 335 TAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVTTTPDDG 508
+A E E E +A E++A+E + EA + E + + G + +T PD G
Sbjct: 95 SAGESEKSESPEIPEPEAKMEEQAVEAAEASEASDDGREDGEIRDDQGNTTSTPPDPG 152
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +2
Query: 329 EQTAKEKELDSGTPENEKDATTEKEAIENSNEK------EAGPVTNGESEQKAENGESVT 490
E T E T E+E++ TT K A + + K EA + + K E VT
Sbjct: 200 EATTTSSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVT 259
Query: 491 TTPD 502
TTP+
Sbjct: 260 TTPE 263
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 1/136 (0%)
Frame = +2
Query: 341 KEKELDSGTPENEKDATTEKEAIENSNEKEA-GPVTNGESEQKAENGESVTTTPDDGXXX 517
K E +SG E+ TT + E+ + E E+ E E TTT +
Sbjct: 152 KTTEEESGNVSAEEVTTTSSTEVSVEEEQTVKSTEASTEEEKSTEASEEATTTSSETSET 211
Query: 518 XXXXXXXXWSLRSISFSRKDKPXXXXXXXXXXXXXNGEPEKVPEEVIEAXAEQSQNETVE 697
+ + + K +K EE + E S E+ E
Sbjct: 212 TEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEPSTEESSE 271
Query: 698 EVKTPSEANEDKTPET 745
+T E ++ T
Sbjct: 272 SPETSEEPQSSESTPT 287
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 320 HIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESE 460
H HE +E E DS PE E+ + E+E + E G + ES+
Sbjct: 331 HDHEDEPEEPENDSNVPEAEEKSDEEQEIMMEDVEGLEGGENDSESD 377
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 320 HIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESE 460
H HE +E E DS PE E+ + E+E + E G + ES+
Sbjct: 331 HDHEDEPEEPENDSNVPEAEEKSDEEQEIMMEDVEGLEGGENDSESD 377
>AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical
protein M04F3.2 protein.
Length = 157
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 308 NGDAHIHEQTAKE---KELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAENG 478
N H +Q A+E KE+ + T + E +EN EK+ V N E K N
Sbjct: 39 NACLHSGQQDAEETEVKEIRENATRKQGATTGQVEEVENQTEKDREIVMNRERNLKRANE 98
Query: 479 ESVTT 493
E TT
Sbjct: 99 EWGTT 103
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 448
E+ A DA P++ + E+ K+ + ++ TP +KD + A++ +E P T+
Sbjct: 140 EEAATEDAPVPEV---PEVTERRKKQNK-ENATPLVKKDLKRKAPAVKIEEPEEPEPGTS 195
Query: 449 GESEQKAENGE-SVTTTP 499
++NG+ +++TTP
Sbjct: 196 QNEPSTSQNGKTTLSTTP 213
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 329 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKE 430
++T KEK L+ E EKD ++E EN E++
Sbjct: 1309 KETGKEKRLEKDNKEREKDKERKRENGENQKEQK 1342
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +2
Query: 284 VDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQ 463
VD LK +++ K+ E + G + ++ + +KE + ++ + E+
Sbjct: 1271 VDRLKRSDEPSKKDEKESPKDTESEKGEGKKRRERSKDKETGKEKRLEKDNKEREKDKER 1330
Query: 464 KAENGES 484
K ENGE+
Sbjct: 1331 KRENGEN 1337
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Frame = +2
Query: 329 EQTAKEKELDSGTPENEKDATT--------EKEAIENSNEKEAGPVTNGESEQKAE---N 475
++ AK+KE D ++E++A T EK+ +N +KE ESE++ E +
Sbjct: 375 QEDAKKKEGDEEEEKDEEEAETTTVVKEDEEKKEGDNEGDKEEDKEDKKESEEEEEKDGD 434
Query: 476 GESVTTTPDD 505
E TTT +D
Sbjct: 435 DEETTTTSED 444
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Frame = +2
Query: 329 EQTAKEKELDSGTPENEKDATT--------EKEAIENSNEKEAGPVTNGESEQKAE---N 475
++ AK+KE D ++E++A T EK+ +N +KE ESE++ E +
Sbjct: 375 QEDAKKKEGDEEEEKDEEEAETTTVVKEDEEKKEGDNEGDKEEDKEDKKESEEEEEKDGD 434
Query: 476 GESVTTTPDD 505
E TTT +D
Sbjct: 435 DEETTTTSED 444
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 356 DSGTPENEKDATTEKEAIENSNEKEAGPVTNGES-EQKAENGE 481
DS T E +K T++ +E +EK+ P GE+ E K ENG+
Sbjct: 509 DSSTCEQKK---TDESGLEEDSEKDQKPSDAGETDEMKEENGD 548
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 356 DSGTPENEKDATTEKEAIENSNEKEAGPVTNGES-EQKAENGE 481
DS T E +K T++ +E +EK+ P GE+ E K ENG+
Sbjct: 509 DSSTCEQKK---TDESGLEEDSEKDQKPSDAGETDEMKEENGD 548
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEK-EAGPVT 445
E L +D P N + +++ PE E +E+ E S EK + P
Sbjct: 958 EFLMKIDTPAPDPNAMVVEKILNMRMGKVEKKVPETEVAEGSEENGEEKSEEKVKKEPKE 1017
Query: 446 NGESEQKAENGES 484
NGE+ + NGES
Sbjct: 1018 NGENGESVGNGES 1030
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 GDAHIHEQTAKEKELDSGTPENEKDAT--TEKEAIENSNEKEAGPVTNGESEQKAENGES 484
GD+ + E++ D +NE T T K + ++ + K G T+ +E + G
Sbjct: 17 GDSSSDVDSGPERDRDEDDSDNESRNTSKTSKSSKKSKSGKSTG--TSEMTELSDDGGSD 74
Query: 485 VTTTPDDG 508
+ PDDG
Sbjct: 75 IELLPDDG 82
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 GDAHIHEQTAKEKELDSGTPENEKDAT--TEKEAIENSNEKEAGPVTNGESEQKAENGES 484
GD+ + E++ D +NE T T K + ++ + K G T+ +E + G
Sbjct: 17 GDSSSDVDSGPERDRDEDDSDNESRNTSKTSKSSKKSKSGKSTG--TSEMTELSDDGGSD 74
Query: 485 VTTTPDDG 508
+ PDDG
Sbjct: 75 IELLPDDG 82
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 272 QLADVDALKPQIN-GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 448
Q++ ++ P I GD + E + + L ++ KDA EKE + EA N
Sbjct: 478 QMSGRNSCMPCITAGDIYTIEDGSLQPNLKKKKSKSRKDAKAEKE-----KKDEAKNDKN 532
Query: 449 GESEQKAENGE--SVTTTPD 502
E E+ AEN E S ++PD
Sbjct: 533 MEIEENAENAEKSSYDSSPD 552
>AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical
protein Y47H9C.15 protein.
Length = 190
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 674 QSQNETVEEVKTPSEANEDKTPETPVY*THHK 769
Q E EE T ++A E K E P++ HHK
Sbjct: 48 QGAKEKFEEEATKNKARERKWVEEPIFWNHHK 79
>Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical
protein F23D12.10 protein.
Length = 552
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 635 EKVPEEVIEAXAEQSQNETVEEVKTPSEANEDK 733
E PEEVI + +N+ +++VK P AN K
Sbjct: 358 EITPEEVIGSTQNLHENKAIKDVKVPINANNLK 390
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +2
Query: 635 EKVPEEVIEAXAEQSQNE------TVEEVKTPSEANEDKTPETP 748
EK P+ V E A ++ E VEEVK+P E + +K E P
Sbjct: 1691 EKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKP 1734
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +2
Query: 635 EKVPEEVIEAXAEQSQNE------TVEEVKTPSEANEDKTPETP 748
EK P+ V E A ++ E VEEVK+P E + +K E P
Sbjct: 1691 EKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKP 1734
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +2
Query: 635 EKVPEEVIEAXAEQSQNE------TVEEVKTPSEANEDKTPETP 748
EK P+ V E A ++ E VEEVK+P E + +K E P
Sbjct: 1691 EKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKP 1734
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +2
Query: 635 EKVPEEVIEAXAEQSQNE------TVEEVKTPSEANEDKTPETP 748
EK P+ V E A ++ E VEEVK+P E + +K E P
Sbjct: 1691 EKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKP 1734
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 287 DALKPQINGDAH-IHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQ 463
+ L NG A T K KE P ++DAT E N + P T+ ESEQ
Sbjct: 1410 EVLAKAANGSAQGSSRSTPKPKEEPKEEPMEKEDAT------ETVNGATSEPATDAESEQ 1463
Query: 464 KAENGESVTT 493
A E + T
Sbjct: 1464 NAPVDEPMDT 1473
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 329 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVTT 493
E EKE + + EK ++++ A ++ NE+E T+G + E E ++
Sbjct: 312 EDEEDEKEAPKSSKKQEKAKSSKRVAEDSGNEEEDQDNTSGSGSEGEEEEEEASS 366
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 287 DALKPQINGDAH-IHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQ 463
+ L NG A T K KE P ++DAT E N + P T+ ESEQ
Sbjct: 1410 EVLAKAANGSAQGSSRSTPKPKEEPKEEPMEKEDAT------ETVNGATSEPATDAESEQ 1463
Query: 464 KAENGESVTT 493
A E + T
Sbjct: 1464 NAPVDEPMDT 1473
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENS 418
++ AD DAL+ + + + E+E D P E+D E+ + NS
Sbjct: 776 QEAADQDALEQDVRERNLLDHEAENEEEDDGDLPYEEEDDEEEEVHVRNS 825
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 287 DALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNE 424
D + G+A E+ A + +L TP E +A + EA E+ +E
Sbjct: 15 DQFRDMEEGEASDDEEIAVKDDLKKRTPRGEDEADEDDEADEDEDE 60
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 287 DALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNE 424
D + G+A E+ A + +L TP E +A + EA E+ +E
Sbjct: 141 DQFRDMEEGEASDDEEIAVKDDLKKRTPRGEDEADEDDEADEDEDE 186
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 269 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENS 418
++ AD DAL+ + + + E+E D P E+D E+ + NS
Sbjct: 776 QEAADQDALEQDVRERNLLDHEAENEEEDDGDLPYEEEDDEEEEVHVRNS 825
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 269 EQLADVDAL--KPQINGDAHIHEQTAKEKELDS-GTPENEKDATTEKEAIENSNEKEAGP 439
E++ VD + KP G+ E T+ + E +S + ++E TT ENS+E
Sbjct: 282 EKIDKVDKIDEKPSEKGEIS-SESTSSDSESESESSTDSETTTTTTTTTTENSSETVRKI 340
Query: 440 VTNGESEQKAEN 475
T E+E K E+
Sbjct: 341 DTPPEAENKEES 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,817,559
Number of Sequences: 27780
Number of extensions: 266068
Number of successful extensions: 1497
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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