Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_P07
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.      218   1e-56
BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p pro...   218   1e-56
AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA...   218   1e-56
L08825-1|AAA28914.1|  723|Drosophila melanogaster single-strande...   216   3e-56
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    29   8.6  

>X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.
          Length = 723

 Score =  218 bits (532), Expect = 1e-56
 Identities = 95/142 (66%), Positives = 121/142 (85%), Gaps = 1/142 (0%)
 Frame = +1

Query: 304 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 483
           GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 484 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 663
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 664 TGKNEVTLEFHQNDDTP-GIID 726
           TGKNEVTLEFHQNDD P G+++
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLE 162



 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +2

Query: 716 VSLMEMRFHIPTSEVANDLDAVEAXXXQVMNKASVISVSGDAIAIFRELQ 865
           V L+EMRFHIP  E A + D V+     VM+KASVIS SG++IAIFRE+Q
Sbjct: 158 VGLLEMRFHIPAVESAEE-DPVDKFHQNVMSKASVISASGESIAIFREIQ 206


>BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p
           protein.
          Length = 723

 Score =  218 bits (532), Expect = 1e-56
 Identities = 95/142 (66%), Positives = 121/142 (85%), Gaps = 1/142 (0%)
 Frame = +1

Query: 304 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 483
           GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 484 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 663
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 664 TGKNEVTLEFHQNDDTP-GIID 726
           TGKNEVTLEFHQNDD P G+++
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLE 162



 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +2

Query: 716 VSLMEMRFHIPTSEVANDLDAVEAXXXQVMNKASVISVSGDAIAIFRELQ 865
           V L+EMRFHIP  E A + D V+     VM+KASVIS SG++IAIFRE+Q
Sbjct: 158 VGLLEMRFHIPAVESAEE-DPVDKFHQNVMSKASVISASGESIAIFREIQ 206


>AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA
           protein.
          Length = 723

 Score =  218 bits (532), Expect = 1e-56
 Identities = 95/142 (66%), Positives = 121/142 (85%), Gaps = 1/142 (0%)
 Frame = +1

Query: 304 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 483
           GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 484 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 663
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 664 TGKNEVTLEFHQNDDTP-GIID 726
           TGKNEVTLEFHQNDD P G+++
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLE 162



 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +2

Query: 716 VSLMEMRFHIPTSEVANDLDAVEAXXXQVMNKASVISVSGDAIAIFRELQ 865
           V L+EMRFHIP  E A + D V+     VM+KASVIS SG++IAIFRE+Q
Sbjct: 158 VGLLEMRFHIPAVESAEE-DPVDKFHQNVMSKASVISASGESIAIFREIQ 206


>L08825-1|AAA28914.1|  723|Drosophila melanogaster single-stranded
           recognition proteinprotein.
          Length = 723

 Score =  216 bits (528), Expect = 3e-56
 Identities = 94/142 (66%), Positives = 121/142 (85%), Gaps = 1/142 (0%)
 Frame = +1

Query: 304 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 483
           GRLKMT+QNIIF+N+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFENTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 484 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 663
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 664 TGKNEVTLEFHQNDDTP-GIID 726
           TGKNEVTLEFHQNDD P G+++
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLE 162



 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +2

Query: 716 VSLMEMRFHIPTSEVANDLDAVEAXXXQVMNKASVISVSGDAIAIFRELQ 865
           V L+EMRFHIP  E A + D V+     VM+KASVIS SG++IAIFRE+Q
Sbjct: 158 VGLLEMRFHIPAVESAEE-DPVDKFHQNVMSKASVISASGESIAIFREIQ 206


>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
           protein.
          Length = 4498

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 436 FLKNGTLHRYGGFKEGEQEKVAKFFKAN-YNKDMLEKELSLKGWNWGTAKFNGAVLS 603
           F K+  +  +  +++ EQ   AKF     YNK  L+  +++ GWN  +++F+  V S
Sbjct: 91  FTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQ-LKTMIAIGGWNEASSRFSPLVAS 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,006,249
Number of Sequences: 53049
Number of extensions: 716152
Number of successful extensions: 1415
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)