Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_P06
         (920 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    53   6e-07
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    48   2e-05

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 19/45 (42%), Positives = 31/45 (68%)
 Frame = +2

Query: 269 EDEEAPIEVRGDGNLINRLNXLPIENQPFWYLNWKAYEALXKRPQ 403
           ++   PI+ RGD + +NRL  LP++ QPFW +N++A EA+   P+
Sbjct: 112 DNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEAMRNNPR 156


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = +2

Query: 278 EAPIEVRGDGNLINRLNXLPIENQPFWYLNWKAYEA 385
           + PI+  GD   +N L+ LP+E QPFW++N++A EA
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEA 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,889,867
Number of Sequences: 53049
Number of extensions: 436869
Number of successful extensions: 582
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)